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List of PDB entries containing ligand XYP-XYP

Ligand: XYP-XYP
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Name: XYP=Beta-D-Xylopyranose,
Links: XYP
The following 76 PDB entries contain the ligand XYP-XYP. The count column shows the number of instances of the molecule in the structure.

PDB id Count Name Method Date
1bcx       Mutational and crystallographic analyses of the active site residues of the bacillus circulans xylanase   X-ray(1.81Å)   15-Oct-94
1goq       Thermostable xylanase i from thermoascus aurantiacus - room temperature xylobiose complex   X-ray(1.8Å)   07-Dec-01
1gqj       Structure of pseudomonas cellulosa alpha-d-glucuronidase complexed with xylobiose   X-ray(1.9Å)   26-Sep-02
1gql       Structure of pseudomonas cellulosa alpha-d-glucuronidase complexed with glucuronic acid and xylotriose   X-ray(1.67Å)   26-Sep-02
1isw       Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with xylobiose   X-ray(2.1Å)   20-Feb-02
1isx       Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with xylotriose   X-ray(2.1Å)   20-Feb-02
1l8n       The 1.5a crystal structure of alpha-d-glucuronidase from bacillus stearothermophilus t-1, complexed with 4-o-methyl-glucuronic acid and xylotriose   X-ray(1.5Å)   21-Mar-03
1r87       Crystal structure of the extracellular xylanase from geobacillus stearothermophilus t-6 (xt6, monoclinic form): the complex of the wt enzyme with xylopentaose at 1.67a resolution   X-ray(1.67Å)   20-Jul-04
1uy2       Binding sub-site dissection of a family 6 carbohydrate-binding module by x-ray crystallography and isothermal titration calorimetry   X-ray(1.7Å)   18-Jun-04
1v6u       Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with 2(2)-alpha-l-arabinofuranosyl-xylobiose   X-ray(2.1Å)   27-Apr-04
1v6v       Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with 3(2)-alpha-l-arabinofuranosyl-xylotriose   X-ray(2.1Å)   27-Apr-04
1v6w       Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with 2(2)-4-o-methyl-alpha-d-glucuronosyl-xylobiose   X-ray(2Å)   27-Apr-04
1v6x       Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with 3(3)-4-o-methyl-alpha-d-glucuronosyl-xylotriose   X-ray(2.1Å)   27-Apr-04
1w9t       Structure of a beta-1,3-glucan binding cbm6 from bacillus halodurans in complex with xylobiose   X-ray(1.62Å)   03-Nov-04
1wu6       Crystal structure of reducing-end-xylose releasing exo-oligoxylanase e70a mutant complexed with xylobiose   X-ray(1.45Å)   22-Feb-05
2b46       Crystal structure of an engineered uninhibited bacillus subtilis xylanase in substrate bound state   X-ray(2.22Å)   19-Sep-06
2nqy       Crystal structure of alkaline thermophlic xylanase from bacillus sp. (Ncl 86-6-10) with complex xylotriose: xylotriose cleaved to xylobiose and xylose   X-ray(2.4Å)   06-Nov-07
2qz2       Crystal structure of a glycoside hydrolase family 11 xylanase from aspergillus niger in complex with xylopentaose   X-ray(2.8Å)   25-Dec-07
2vgd       Crystal structure of environmental isolated gh11 in complex with xylobiose and feruloyl-arabino-xylotriose   X-ray(1.8Å)   25-Dec-07
2wys       High resolution crystallographic structure of the clostridium thermocellum n-terminal endo-1,4-beta-d-xylanase 10b (xyn10b) cbm22- 1- gh10 modules complexed with xylohexaose   X-ray(2.75Å)   25-Aug-10
3mmd       Crystal structure of the w241a mutant of xylanase from geobacillus stearothermophilus t-6 (xt6) complexed with hydrolyzed xylopentaose   X-ray(1.7Å)   27-Apr-11
3msd       Enzyme-substrate interactions of ixt6, the intracellular xylanase of g. Stearothermophilus.   X-ray(1.58Å)   11-May-11
3msg       Enzyme-substrate interactions of ixt6, the intracellular xylanase of g. Stearothermophilus.   X-ray(1.5Å)   11-May-11
3mua       Enzyme-substrate interactions of ixt6, the intracellular xylanase of g. Stearothermophilus.   X-ray(1.5Å)   01-Jun-11
3mui       Enzyme-substrate interactions of ixt6, the intracellular xylanase of g. Stearothermophilus.   X-ray(1.8Å)   01-Jun-11
3nj3       Crystal structure of xylanase 10b from thermotoga petrophila rku-1 in complex with xylobiose   X-ray(1.88Å)   04-May-11
3vsu       The complex structure of xylc with xylobiose   X-ray(2.05Å)   27-Feb-13
3vxc       Crystal structure of xylobiose-bxle complex from streptomyces thermoviolaceus opc-520   X-ray(1.85Å)   18-Sep-13
3w25       The high-resolution crystal structure of tsxyla, intracellular xylanase from /thermoanaerobacterium saccharolyticum jw/sl-ys485/: the complex of the e146a mutant with xylobiose   X-ray(1.32Å)   03-Apr-13
3wp6       The complex structure of cdbfv e109a with xylotriose   X-ray(1.43Å)   19-Mar-14
3wue       The wild type crystal structure of b-1,4-xylanase (xynas9) with xylobiose from streptomyces sp. 9   X-ray(2.15Å)   29-Oct-14
3wug       The mutant crystal structure of b-1,4-xylanase (xynas9_v43p/g44e) with xylobiose from streptomyces sp. 9   X-ray(1.88Å)   29-Oct-14
4c1p       Geobacillus thermoglucosidasius gh family 52 xylosidase   X-ray(2.63Å)   14-May-14
4d5q       Hypocrea jecorina cel7a (wild type) soaked with xylopentaose.   X-ray(1.68Å)   25-Mar-15
4hkw       Crystal structures of mutant endo-beta-1,4-xylanase ii complexed with substrate and products   X-ray(1.65Å)   08-Jan-14
4lw6       Crystal structure of catalytic domain of drosophila beta1, 4galactosyltransferase 7 complex with xylobiose   X-ray(2.4Å)   25-Sep-13
4m4k       Crystal structure of the drosphila beta,14galactosyltransferase 7 mutant d211n complex with manganese, udp-gal and xylobiose   X-ray(2.2Å)   25-Sep-13
4pmd       Crystal structure of cbxyn10b from caldicellulosiruptor bescii and its mutant(e139a) in complex with hydrolyzed xylotetraose   X-ray(1.7Å)   24-Jun-15
4pmz       Crystal structure of gh10 endo-b-1,4-xylanase (xynb) from xanthomonas axonopodis pv citri complexed with xylobiose   X-ray(1.4Å)   08-Oct-14
4u5i       Complex structure of mutant ctcel5e (e314a) with xylobiose   X-ray(2.5Å)   14-Jan-15
4xuq       Structure of the cbm22-2 xylan-binding domain from paenibacillus barcinonensis xyn10c in complex with xylotriose   X-ray(1.95Å)   03-Jun-15
4xur       Structure of the cbm22-2 xylan-binding domain from paenibacillus barcinonensis xyn10c in complex with xylotetraose   X-ray(1.67Å)   03-Jun-15
5a6l       High resolution structure of the thermostable glucuronoxylan endo- beta-1, 4-xylanase, ctxyn30a, from clostridium thermocellum with two xylobiose units bound   X-ray(1.8Å)   19-Oct-16
5a6m       Determining the specificities of the catalytic site from the very high resolution structure of the thermostable glucuronoxylan endo-beta-1, 4-xylanase, ctxyn30a, from clostridium thermocellum with a xylotetraose bound   X-ray(1.17Å)   19-Oct-16
5d4y       A psychrophilic glycoside hydrolase family 10 endo-beta-1,4-xylanase   X-ray(2.5Å)   24-Feb-16
5glm       Crystal structure of coxyl43, gh43 beta-xylosidase/alpha- arabinofuranosidase from a compost microbial metagenome in complex with xylotriose, calcium-free form.   X-ray(1.8Å)   15-Mar-17
5gln       Crystal structure of coxyl43, gh43 beta-xylosidase/alpha- arabinofuranosidase from a compostmicrobial metagenome in complex with xylotriose, calcium-bound form   X-ray(1.7Å)   15-Mar-17
5glq       Crystal structure of coxyl43, gh43 beta-xylosidase/alpha- arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose and xylotriose, calcium-free form   X-ray(1.7Å)   15-Mar-17
5gqe       Crystal structure of michaelis complex of xylanase mutant (t82a, n127s, and e128h) from streptomyces olivaceoviridis e-86   X-ray(2.5Å)   09-Aug-17
5l6f       Xylooligosaccharide oxidase from myceliophthora thermophila c1 in complex with xylobiose   X-ray(1.8Å)   21-Sep-16
5nln       Auxiliary activity 9   X-ray(1.9Å)   01-Nov-17
5zqs       Crystal structure of beta-xylosidase mutant (e186q/f503y) from bacillus pumilus   X-ray(1.78Å)   30-May-18
5zqx       Crystal structure of beta-xylosidase mutant (e186q) from bacillus pumilus   X-ray(2Å)   30-May-18
6g09       Crystal structure of a gh8 xylobiose complex from teredinibacter turnerae   X-ray(1.4Å)   10-Oct-18
6jdy       Ligand complex structure of gh10 family xylanase xynaf1, soaking for 120 minutes   X-ray(1.5Å)   20-May-20
6jdz       Ligand complex structure of gh10 family xylanase xynaf1, soaking for 20 minutes   X-ray(1.16Å)   20-May-20
6je0       Ligand complex structure of gh10 family xylanase xynaf1, soaking for 30 minutes   X-ray(1.43Å)   20-May-20
6je1       Ligand complex structure of gh10 family xylanase xynaf1, soaking for 40 minutes   X-ray(1.18Å)   20-May-20
6je2       Ligand complex structure of gh10 family xylanase xynaf1, soaking for 80 minutes   X-ray(1.22Å)   20-May-20
6r5v       The crystal structure of glycoside hydrolase bglx inactive mutant d286n from p. Aeruginosa in complex with xylotriose   X-ray(1.8Å)   15-Apr-20
6rv7       Crystal structure of glucuronoyl esterase from cerrena unicolor inactive s270a variant in complex with the aldouronic acid uxxr   X-ray(1.73Å)   18-Mar-20
6rv8       Crystal structure of glucuronoyl esterase from cerrena unicolor covalent complex with the aldouronic acid uxxr   X-ray(1.85Å)   18-Mar-20
6syu       The wild type glucuronoyl esterase otce15a from opitutus terrae in complex with xylobiose   X-ray(1.33Å)   27-Nov-19
7dfo       Crystal structure of glycoside hydrolase family 11 beta-xylanase from streptomyces olivaceoviridis e-86 in complex with 4-o-methyl-alpha-d- glucuronopyranosyl xylotetraose   X-ray(2Å)   30-Dec-20
7l1y       Unlocking the structural features for the exo-xylobiosidase activity of an unusual gh11 member identified in a compost-derived consortium- xylobiose complex   X-ray(1.2Å)   28-Jul-21
7n6o       The crystal structure of the gh30 subfamily 10 enzyme, acxbh30a from acetivibrio clariflavus in complex with xylobiose   X-ray(1.5Å)   17-Aug-22
7wds       Crystal structures of mebgld2 in complex with various saccharides   X-ray(1.68Å)   02-Nov-22
8bf3       Crystal structure of feruloyl esterase wtsfae1b in complex with xylobiose   X-ray(1.19Å)   30-Nov-22
8cbc       Crystal structure of thermothelomyces thermophila gh30 (double mutant ee) in complex with xylotriose.   X-ray(1.4Å)   22-May-24
8qxy       Xylanase from bacillus circulans mutant e78q bound to xylotriose   X-ray(1.41Å)   21-Aug-24
8qy0       Xylanase from bacillus circulans mutant e78q/y69a bound to xylotriose   X-ray(1.9Å)   21-Aug-24
8qy1       Xylanase from bacillus circulans mutant e78q/y69a bound to xylohexaose   X-ray(1.9Å)   21-Aug-24
8xbb       The substrate binding protein of an abc transporter in complex with beta-1,3-xylobiose   X-ray(1.57Å)   11-Dec-24
8xzz       Structure of a xylanase xyl-1 m4 e175a in complex with xylobiose   X-ray(1.72Å)   27-Nov-24
8y00       Structure of a xylanase xyl-1 m4 mutant e175a in complex with xylotriose   X-ray(1.71Å)   27-Nov-24
8y1m       Xylanase r from bacillus sp. Tar-1 complexed with xylobiose.   X-ray(1.8Å)   22-May-24

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