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List of PDB entries containing Het Group XYP

Het Group: XYP
 
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Name: Beta-D-Xylopyranose
Synonym(s): Beta-D-Xylose; d-Xylose; xylose
Formula: C5H10O5
Compound type: D-Saccharide, Beta linking
The following 351 PDB entries (on 4 separate pages) contain the Het Group XYP. The count column shows its number of occurrence in the structure.

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PDB id Count Name Method Date
1ax0   ×0   Erythrina corallodendron lectin in complex with n-actylgalactosamine   X-ray(1.9Å)   06-May-98
1ax1   ×0   Erythrina corallodendron lectin in complex with lactose   X-ray(1.95Å)   06-May-98
1ax2   ×0   Erythrina corallodendron lectin in complex with n-acetyllactosamine   X-ray(1.95Å)   06-May-98
1axy   ×0   Erythrina corallodendron lectin   X-ray(1.95Å)   06-May-98
1axz   ×0   Erythrina corallodendron lectin in complex with d-galactose   X-ray(1.95Å)   06-May-98
1b30   ×0   Xylanase from penicillium simplicissimum, complex with 1,2-(4-deoxy- beta-l-threo-hex-4-enopyranosyluronic acid)-beta-1,4-xylotriose)   X-ray(2.25Å)   31-Mar-99
1b3v   ×2   Xylanase from penicillium simplicissimum, complex with xylose   X-ray(2.4Å)   07-Apr-99
1b3w   ×1   Xylanase from penicillium simplicissimum, complex with xylobiose   X-ray(2.6Å)   07-Apr-99
1b3x   ×1   Xylanase from penicillium simplicissimum, complex with xylotriose   X-ray(2.2Å)   07-Apr-99
1b3y   ×0   Xylanase from penicillium simplicissimum, complex with xylotetraose   X-ray(2.45Å)   06-Apr-99
1b3z   ×2   Xylanase from penicillium simplicissimum, complex with xylopentaose   X-ray(2.3Å)   06-Apr-99
1bcx   ×0   Mutational and crystallographic analyses of the active site residues of the bacillus circulans xylanase   X-ray(1.81Å)   15-Oct-94
1bvv   ×0   Sugar ring distortion in the glycosyl-enzyme intermediate of a family g/11 xylanase   X-ray(1.8Å)   08-Jun-99
1c5i   ×0   Hydrogen bonding and catalysis: an unexpected explanation for how a single amino acid substitution can change the ph optimum of a glycosidase   X-ray(1.8Å)   12-May-00
1cb8   ×0   Chondroitinase ac lyase from flavobacterium heparinum   X-ray(1.9Å)   14-May-99
1cf5   ×1   Beta-momorcharin structure at 2.55 a   X-ray(2.55Å)   07-Jun-99
1dbg   ×0   Crystal structure of chondroitinase b   X-ray(1.7Å)   12-Jan-00
1dbo   ×0   Crystal structure of chondroitinase b   X-ray(1.7Å)   12-Jan-00
1dwa   ×1   Study on radiation damage on a cryocooled crystal. Part 1: structure prior to irradiation   X-ray(2Å)   03-Mar-00
1dwf   ×1   Study on radiation damage on a cryocooled crystal. Part 2: structure after irradiation with 9.1 10E15 photons/mm2   X-ray(2Å)   03-Mar-00
1dwg   ×1   Study on radiation damage on a cryocooled crystal: part 3 structure after irradiation with 18.2 10E15 photons/mm2.   X-ray(2Å)   03-Mar-00
1dwh   ×1   Study on radiation damage on a cryocooled crystal. Part 4: structure after irradiation with 27.2 10E15 photons/mm2   X-ray(2Å)   03-Mar-00
1dwi   ×1   Study on radiation damage on a cryocooled crystal. Part 5: structure after irradiation with 54.0 10E15 photons/mm2   X-ray(2Å)   03-Mar-00
1dwj   ×1   Study on radiation damage on a cryocooled crystal. Refined part 6: structure after a radiation dose of 54 10E15 photons/mm2   X-ray(2.4Å)   03-Mar-00
1e0x   ×1   Xylanase 10a from sreptomyces lividans. Xylobiosyl-enzyme intermediate at 1.65 a   X-ray(1.65Å)   05-Apr-01
1e4m   ×1   Myrosinase from sinapis alba   X-ray(1.2Å)   25-May-01
1e5n   ×5   E246c mutant of p fluorescens subsp. Cellulosa xylanase a in complex with xylopentaose   X-ray(3.2Å)   08-Dec-00
1e6q   ×1   Myrosinase from sinapis alba with the bound transition state analogue gluco-tetrazole   X-ray(1.35Å)   05-Jan-01
1e6s   ×1   Myrosinase from sinapis alba with bound gluco-hydroximolactam and sulfate   X-ray(1.35Å)   06-Sep-00
1e6x   ×1   Myrosinase from sinapis alba with a bound transition state analogue,d- glucono-1,5-lactone   X-ray(1.6Å)   05-Jan-01
1e70   ×1   2-f-glucosylated myrosinase from sinapis alba   X-ray(1.65Å)   05-Jan-01
1e71   ×1   Myrosinase from sinapis alba with bound ascorbate   X-ray(1.5Å)   05-Jan-01
1e72   ×1   Myrosinase from sinapis alba with bound gluco-hydroximolactam and sulfate or ascorbate   X-ray(1.6Å)   05-Jan-01
1e73   ×1   2-f-glucosylated myrosinase from sinapis alba with bound l-ascorbate   X-ray(1.5Å)   05-Jan-01
1fh7   ×0   Crystal structure of the xylanase cex with xylobiose-derived inhibitor deoxynojirimycin   X-ray(1.82Å)   23-Aug-00
1fh8   ×0   Crystal structure of the xylanase cex with xylobiose-derived isofagomine inhibitor   X-ray(1.95Å)   23-Aug-00
1fh9   ×0   Crystal structure of the xylanase cex with xylobiose-derived lactam oxime inhibitor   X-ray(1.72Å)   23-Aug-00
1fhd   ×0   Crystal structure of the xylanase cex with xylobiose-derived imidazole inhibitor   X-ray(1.9Å)   23-Aug-00
1gny   ×0   Xylan-binding module cbm15   X-ray(1.63Å)   29-Nov-01
1goq   ×4   Thermostable xylanase i from thermoascus aurantiacus - room temperature xylobiose complex   X-ray(1.8Å)   07-Dec-01
1gor   ×0   Thermostable xylanase i from thermoascus aurantiacus - xylobiose complex at 100 k   X-ray(1.7Å)   07-Dec-01
1gqj   ×2   Structure of pseudomonas cellulosa alpha-d-glucuronidase complexed with xylobiose   X-ray(1.9Å)   26-Sep-02
1gql   ×2   Structure of pseudomonas cellulosa alpha-d-glucuronidase complexed with glucuronic acid and xylotriose   X-ray(1.67Å)   26-Sep-02
1h12   ×0   Structure of a cold-adapted family 8 xylanase   X-ray(1.2Å)   13-Mar-03
1h4g   ×1   Oligosaccharide-binding to family 11 xylanases: both covalent intermediate and mutant-product complexes display 2,5b conformations at the active-centre   X-ray(1.1Å)   09-May-02
1h4h   ×6   Oligosaccharide-binding to family 11 xylanases: both covalent intermediate and mutant-product complexes display 2,5b conformations at the active-centre   X-ray(1.9Å)   09-May-02
1hm2   ×0   Active site of chondroitinase ac lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis   X-ray(2Å)   02-May-01
1hm3   ×0   Active site of chondroitinase ac lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis   X-ray(2.1Å)   02-May-01
1hmu   ×0   Active site of chondroitinase ac lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis   X-ray(2Å)   02-May-01
1hmw   ×0   Active site of chondroitinase ac lyase revealed by the structure of enzyme-oligosaccharide complexes and mutagenesis   X-ray(2.3Å)   02-May-01
1ioo   ×1   Crystal structure of nicotiana alata gemetophytic self-incompatibility associated sf11-rnase   X-ray(1.55Å)   08-May-02
1iqq   ×0   Crystal structure of japanese pear s3-rnase   X-ray(1.5Å)   07-Nov-01
1isv   ×5   Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with xylose   X-ray(2.1Å)   20-Feb-02
1isw   ×12   Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with xylobiose   X-ray(2.1Å)   20-Feb-02
1isx   ×14   Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with xylotriose   X-ray(2.1Å)   20-Feb-02
1j10   ×6   Beta-amylase from bacillus cereus var. Mycoides in complex with ggx   X-ray(2.1Å)   17-Jun-03
1k9f   ×0   Crystal structure of a mutated family-67 alpha-d-glucuronidase (e285n) from bacillus stearothermophilus t-6, complexed with aldotetraouronic acid   X-ray(1.75Å)   29-Oct-02
1l8n   ×0   The 1.5a crystal structure of alpha-d-glucuronidase from bacillus stearothermophilus t-1, complexed with 4-o-methyl-glucuronic acid and xylotriose   X-ray(1.5Å)   21-Mar-03
1mc9   ×0   Strepromyces lividans xylan binding domain cbm13 in complex with xylopentaose   X-ray(1.7Å)   11-Sep-02
1myr   ×1   Myrosinase from sinapis alba   X-ray(1.64Å)   16-Jun-97
1nae   ×0   Structure of cscbm6-3 from clostridium stercorarium in complex with xylotriose   X-ray(2.05Å)   18-Mar-03
1od8   ×1   Xylanase xyn10a from streptomyces lividans in complex with xylobio- isofagomine lactam   X-ray(1.05Å)   08-Apr-03
1ofl   ×0   Crystal structure of chondroitinase b complexed to dermatan sulfate hexasaccharide   X-ray(1.7Å)   10-Jun-04
1ofm   ×0   Crystal structure of chondroitinase b complexed to chondroitin 4- sulfate tetrasaccharide   X-ray(1.8Å)   19-Apr-04
1px8   ×1   Crystal structure of beta-d-xylosidase from thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase   X-ray(2.4Å)   23-Dec-03
1qh6   ×1   Catalysis and specificity in enzymatic glycoside hydrolases: a 2,5b conformation for the glycosyl-enzyme intermidiate revealed by the structure of the bacillus agaradhaerens family 11 xylanase   X-ray(2Å)   17-May-00
1qh7   ×1   Catalysis and specificity in enzymatic glycoside hydrolases: a 2,5b conformation for the glycosyl-enzyme intermidiate revealed by the structure of the bacillus agaradhaerens family 11 xylanase   X-ray(1.78Å)   17-May-00
1qk0   ×0   Cel6a with a non-hydrolysable cellotetraose   X-ray(2.1Å)   18-Sep-99
1qw8   ×1   Crystal structure of a family 51 alpha-l-arabinofuranosidase in complex with ara-alpha(1,3)-xyl   X-ray(1.8Å)   07-Oct-03
1r87   ×3   Crystal structure of the extracellular xylanase from geobacillus stearothermophilus t-6 (xt6, monoclinic form): the complex of the wt enzyme with xylopentaose at 1.67a resolution   X-ray(1.67Å)   20-Jul-04
1uqy   ×4   Xylanase xyn10b mutant (e262s) from cellvibrio mixtus in complex with xylopentaose   X-ray(1.72Å)   18-Dec-03
1uqz   ×2   Xylanase xyn10b mutant (e262s) from cellvibrio mixtus in complex with 4-o-methyl glucuronic acid   X-ray(1.55Å)   18-Dec-03
1ur1   ×0   Xylanase xyn10b mutant (e262s) from cellvibrio mixtus in complex with arabinofuranose alpha-1,3 linked to xylobiose   X-ray(1.43Å)   18-Dec-03
1ur2   ×2   Xylanase xyn10b mutant (e262s) from cellvibrio mixtus in complex with arabinofuranose alpha 1,3 linked to xylotriose   X-ray(1.6Å)   18-Dec-03
1us2   ×4   Xylanase10c (mutant e385a) from cellvibrio japonicus in complex with xylopentaose   X-ray(1.85Å)   18-Dec-03
1ux7   ×0   Carbohydrate-binding module cbm36 in complex with calcium and xylotriose   X-ray(1.5Å)   27-Oct-04
1uxx   ×0   Cbm6ct from clostridium thermocellum in complex with xylopentaose   X-ray(1.6Å)   11-Mar-04
1uy2   ×0   Binding sub-site dissection of a family 6 carbohydrate-binding module by x-ray crystallography and isothermal titration calorimetry   X-ray(1.7Å)   18-Jun-04
1uy3   ×0   Binding sub-site dissection of a family 6 carbohydrate-binding module by x-ray crystallography and isothermal titration calorimetry   X-ray(1.89Å)   18-Jun-04
1uy4   ×0   Binding sub-site dissection of a family 6 carbohydrate-binding module by x-ray crystallography and isothermal titration calorimetry   X-ray(1.69Å)   18-Jun-04
1uyz   ×0   Carbohydrate binding module (cbm6cm-2) from cellvibrio mixtus lichenase 5a in complex with xylotetraose   X-ray(1.6Å)   11-Mar-04
1uzy   ×0   Erythrina crystagalli lectin   X-ray(2Å)   22-Jun-04
1v0k   ×0   Xylanase xyn10a from streptomyces lividans in complex with xylobio- deoxynojirimycin at ph 5.8   X-ray(1.03Å)   16-Aug-04
1v0l   ×0   Xylanase xyn10a from streptomyces lividans in complex with xylobio- isofagomine at ph 5.8   X-ray(0.98Å)   16-Aug-04
1v0m   ×0   Xylanase xyn10a from streptomyces lividans in complex with xylobio- deoxynojirimycin at ph 7.5   X-ray(1.07Å)   16-Aug-04
1v0n   ×0   Xylanase xyn10a from streptomyces lividans in complex with xylobio- isofagomine at ph 7.5   X-ray(1.1Å)   16-Aug-04
1v6u   ×12   Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with 2(2)-alpha-l-arabinofuranosyl-xylobiose   X-ray(2.1Å)   27-Apr-04
1v6v   ×16   Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with 3(2)-alpha-l-arabinofuranosyl-xylotriose   X-ray(2.1Å)   27-Apr-04
1v6w   ×6   Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with 2(2)-4-o-methyl-alpha-d-glucuronosyl-xylobiose   X-ray(2Å)   27-Apr-04
1v6x   ×15   Crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with 3(3)-4-o-methyl-alpha-d-glucuronosyl-xylotriose   X-ray(2.1Å)   27-Apr-04
1vbr   ×1   Crystal structure of complex xylanase 10b from thermotoga maritima with xylobiose   X-ray(1.8Å)   28-Jun-05
1w9b   ×1   S. Alba myrosinase in complex with carba-glucotropaeolin   X-ray(1.7Å)   19-May-05
1w9d   ×1   S. Alba myrosinase in complex with s-ethyl phenylacetothiohydroximate- o-sulfate   X-ray(1.6Å)   19-May-05
1w9t   ×6   Structure of a beta-1,3-glucan binding cbm6 from bacillus halodurans in complex with xylobiose   X-ray(1.62Å)   03-Nov-04
1wu5   ×0   Crystal structure of reducing-end-xylose releasing exo-oligoxylanase complexed with xylose   X-ray(2.2Å)   22-Feb-05
1wu6   ×0   Crystal structure of reducing-end-xylose releasing exo-oligoxylanase e70a mutant complexed with xylobiose   X-ray(1.45Å)   22-Feb-05
1x38   ×1   Crystal structure of barley beta-d-glucan glucohydrolase isoenzyme exo1 in complex with gluco-phenylimidazole   X-ray(1.7Å)   20-Dec-05
1x39   ×1   Crystal structure of barley beta-d-glucan glucohydrolase isoenzyme exo1 in complex with gluco-phenylimidazole   X-ray(1.8Å)   20-Dec-05
1xwq   ×0   Structure of a cold-adapted family 8 xylanase   X-ray(1.88Å)   11-Oct-05
2b46   ×0   Crystal structure of an engineered uninhibited bacillus subtilis xylanase in substrate bound state   X-ray(2.22Å)   19-Sep-06

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