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Ligand clusters for UniProt code Q9Y9L0

Ligand clusters for Q9Y9L0: Peroxiredoxin OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=APE_2278 PE=1 SV=1

Top 6 (of 19) ligand clusters
Cluster 1.
7 ligand types
13 ligands
Cluster 2.
2 ligand types
8 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1x0rA  
JSmol
 

Structures

PDB   Schematic diagram
1x0rA    
6krqA    
3a2wA    
7c87A    
7c8aA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: CIT × 7
citric acid
Citric acid
PDB codes: 6krk(A), 6krm(A), 6krp(A), 6krq(A), 6krs(A), 7c87(A), 7c8a(A).


 
2. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3a2w(A).


 
3. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 1x0r(A).


 
4. Ligand: ACT × 1
Acetate ion
PDB code: 3a2x(A).


 
5. Ligand: FL0 × 1
2-Bromanyl-1-Phenyl-Ethanone
PDB code: 7c89(A).


 
6. Ligand: FL3 × 1
1-Naphthalen-2-Ylethanone
PDB code: 7c8a(A).


 
7. Ligand: FLC × 1
Citrate anion
PDB code: 7c89(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: CIT × 7
citric acid
Citric acid
PDB codes: 6krk(A), 6krm(A), 6krp(A), 6krq(A), 6krs(A), 7c87(A), 7c8a(A).


 
2. Ligand: FLC × 1
Citrate anion
PDB code: 7c89(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: FL0 × 1
2-Bromanyl-1-Phenyl-Ethanone
PDB code: 7c89(A).


 
2. Ligand: FL3 × 1
1-Naphthalen-2-Ylethanone
PDB code: 7c8a(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code: 2cv4(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: IPA × 1
isopropyl alcohol
Isopropyl alcohol
PDB code: 2cv4(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 1x0r(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 1x0r(A).

 

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