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Ligand clusters for UniProt code Q9Y9L0
Ligand clusters for Q9Y9L0: Peroxiredoxin OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=APE_2278 PE=1 SV=1
Top 6 (of 19) ligand clusters
Cluster 1.
7 ligand types
13 ligands
Cluster 2.
2 ligand types
8 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1x0rA
Structures
PDB
Schematic diagram
1x0r
A
6krq
A
3a2w
A
7c87
A
7c8a
A
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
1. Ligand:
CIT × 7
citric acid
Citric acid
PDB codes:
6krk
(A),
6krm
(A),
6krp
(A),
6krq
(A),
6krs
(A),
7c87
(A),
7c8a
(A).
2. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3a2w
(A).
3. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
1x0r
(A).
4. Ligand:
ACT × 1
Acetate ion
PDB code:
3a2x
(A).
5. Ligand:
FL0 × 1
2-Bromanyl-1-Phenyl-Ethanone
PDB code:
7c89
(A).
6. Ligand:
FL3 × 1
1-Naphthalen-2-Ylethanone
PDB code:
7c8a
(A).
7. Ligand:
FLC × 1
Citrate anion
PDB code:
7c89
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
CIT × 7
citric acid
Citric acid
PDB codes:
6krk
(A),
6krm
(A),
6krp
(A),
6krq
(A),
6krs
(A),
7c87
(A),
7c8a
(A).
2. Ligand:
FLC × 1
Citrate anion
PDB code:
7c89
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
FL0 × 1
2-Bromanyl-1-Phenyl-Ethanone
PDB code:
7c89
(A).
2. Ligand:
FL3 × 1
1-Naphthalen-2-Ylethanone
PDB code:
7c8a
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code:
2cv4
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
IPA × 1
isopropyl alcohol
Isopropyl alcohol
PDB code:
2cv4
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
1x0r
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
1x0r
(A).