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Ligand clusters for UniProt code Q9XZT6

Ligand clusters for Q9XZT6: Deoxynucleoside kinase from Drosophila melanogaster

Top 6 (of 9) ligand clusters
Cluster 1.
15 ligand types
30 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6ybhA  
JSmol
 

Structures

PDB   Schematic diagram
6ybhA    
2vp2A    
1zmxA    
2vp5A    
2vp9A    
 more ...

 

 Cluster 1 contains 15 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 3
PDB codes: 1oe0(A), 2jcs(A), 2vp0(A).


 
2. Ligand: AZZ × 1
zidovudine
3'-Azido-3'-Deoxythymidine
PDB code: 2jj8(A).


 
3. Ligand: BVD × 1
brivudine
5-Bromovinyldeoxyuridine
PDB code: 2vqs(A).


 
4. Ligand: GEO × 1
gemcitabine
Gemcitabine
PDB code: 2vpp(A).


 
5. Ligand: TTP × 3
Thymidine-5'-Triphosphate
PDB codes: 1oe0(A), 1zm7(A), 2jcs(A).


 
6. Ligand: DCZ × 1
2'-Deoxycytidine
PDB code: 1j90(A).


 
7. Ligand: THM × 2
Thymidine
PDB codes: 1ot3(A), 1zmx(A).


 
8. Ligand: SO4 × 11
Sulfate ion
PDB codes: 1j90(A), 1ot3(A), 1zmx(A), 2jj8(A), 2vp5(A), 2vp6(A), 2vp9(A), 2vpp(A), 2vqs(A), 6ybh(A).


 
9. Ligand: TTP × 1
Thymidine-5'-Triphosphate
PDB code: 2vp0(A).


 
10. Ligand: DCZ × 1
2'-Deoxycytidine
PDB code: 2vp5(A).


 
11. Ligand: 4PC × 1
3-(2'-Deoxy-5-O-Phosphono-Beta-D-Erythro- Pentofuranosyl)-6-Methyl-3,7-Dihydro-2h-Pyrrolo[2,3-
D]pyrimidin-2-One
PDB code: 6ybh(A).


 
12. Ligand: 5FU × 1
5-Fluoro-Uridine-5'-Monophosphate
PDB code: 2vp6(A).


 
13. Ligand: DCP × 1
2'-Deoxycytidine-5'-Triphosphate
PDB code: 2vp4(A).


 
14. Ligand: DGT × 1
2'-Deoxyguanosine-5'-Triphosphate
PDB code: 2vp2(A).


 
15. Ligand: DOC × 1
2',3'-Dideoxycytidine-5'-Monophosphate
PDB code: 2vp9(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6ybh(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6ybh(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1ot3(A), 2vp6(A), 2vp9(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 6ybh(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 6ybh(A).

 

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