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Ligand clusters for UniProt code Q9V118

Ligand clusters for Q9V118: Exosome complex component Rrp42 from Pyrococcus abyssi (strain GE5 / Orsay)

6 ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 2pnzB  
JSmol
 

Structures

PDB   Schematic diagram
2pnzB    
2po2B    
2po0B    
2po1B    

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: 5GP × 1
Guanosine-5'-Monophosphate
PDB code: 2pnz(B).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code: 2pnz(B).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 4
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 2pnz(B), 2po0(B), 2po1(B), 2po2(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 4
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 2pnz(B), 2po0(B), 2po1(B), 2po2(B).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 2po1(B), 2po2(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 2po1(B), 2po2(B).

 

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