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Ligand clusters for UniProt code Q9UXC2

Ligand clusters for Q9UXC2: Exosome complex component Rrp41 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)

2 ligand clusters
Cluster 1.
6 ligand types
14 ligands
Cluster 2.
1 ligand type
2 ligands
Representative protein: 2br2B  
JSmol
 

Structures

PDB   Schematic diagram
2br2B    
2jebB    
3l7zB    
2c37B    
2c38B    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: U5P × 4
Uridine-5'-Monophosphate
PDB codes: 2c37(B),

_Cl
 
2. Metal: _CL × 4
PDB codes: 2br2(B), 2c38(B), 2je6(B), 2jeb(B).


 
3. Ligand: PO4 × 3
Phosphate ion
PDB codes: 4ba1(B), 4ba2(B).


 
4. Ligand: ADP × 1
Adenosine-5'-Diphosphate
PDB code: 2c39(B).


 
5. Ligand: AMP-AMP-AMP-AMP × 1
AMP=Adenosine monophosphate.
PDB code: 2c38(B).


 
6. Ligand: SO4 × 1
Sulfate ion
PDB code: 3l7z(B).

 

 Cluster 2 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 2
PDB codes: 4ba1(B), 4ba2(B).

 

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