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Ligand clusters for UniProt code Q9UPN6

Ligand clusters for Q9UPN6: SR-related and CTD-associated factor 8 from Homo sapiens

Top 6 (of 11) ligand clusters
Cluster 1.
6 ligand types
16 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
2 ligands
Representative protein: 3d9lA  
JSmol
 

Structures

PDB   Schematic diagram
3d9lA    
3d9nA    
3d9pA    
3d9kA    
3d9oA    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: SO4 × 11
Sulfate ion
PDB codes: 3d9i(A), 3d9j(A), 3d9k(A), 3d9m(A), 3d9n(A), 3d9o(A), 3d9p(A),


 
2. Ligand: ACT × 1
Acetate ion
PDB code: 3d9l(A).


 
3. Ligand: PRO-SEP-TYR-SEP-PRO-THR-SER-PRO × 1
SEP=Phosphoserine.
PDB code: 3d9n(A).


 
4. Ligand: PRO-SER-TYR-SEP-PRO-THR × 1
SEP=Phosphoserine.
PDB code: 3d9k(A).


 
5. Ligand: TYR-SEP-PRO × 1
SEP=Phosphoserine.
PDB code: 3d9p(A).


 
6. Ligand: TYR-SER-PRO × 1
PDB code: 3d9m(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3d9i(A), 3d9j(A).


 
2. Ligand: SO4 × 3
Sulfate ion
PDB codes: 3d9i(A), 3d9j(A), 3d9p(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3d9i(A), 3d9j(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 3d9n(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3d9i(A), 3d9j(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3d9j(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 3d9i(A), 3d9j(A).

 

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