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Ligand clusters for UniProt code Q9UMR2

Ligand clusters for Q9UMR2: ATP-dependent RNA helicase DDX19B from Homo sapiens

4 ligand clusters
Cluster 1.
4 ligand types
12 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
2 ligands
Representative protein: 6b4jE  
JSmol
 

Structures

PDB   Schematic diagram
6b4jE    
3fhtA    
3g0hA    
6b4iE    
6b4kA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 2
PDB codes: 6b4j(E), 6b4k(A).


 
2. Ligand: ADP × 4
Adenosine-5'-Diphosphate
PDB codes: 3ews(A), 3fmo(B), 3fmp(B), 6b4i(E).


 
3. Ligand: ANP × 4
Phosphoaminophosphonic acid-Adenylate ester
PDB codes: 3fht(A), 3g0h(A), 6b4j(E), 6b4k(A).


 
4. Ligand: PO4 × 2
Phosphate ion
PDB codes: 6b4i(E), 6b4j(E).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: PO4 × 2
Phosphate ion
PDB codes: 6b4i(E), 6b4j(E).


 
2. Ligand: MLI × 1
Malonate ion
PDB code: 6b4k(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: MLI × 1
Malonate ion
PDB code: 6b4k(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3fht(A), 3g0h(A).

 

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