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Ligand clusters for UniProt code Q9UJM8

Ligand clusters for Q9UJM8: Hydroxyacid oxidase 1 from Homo sapiens

Top 6 (of 10) ligand clusters
Cluster 1.
14 ligand types
30 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 6gmbA  
JSmol
 

Structures

PDB   Schematic diagram
6gmbA    
2rdtA    
5qifA    
5qieA    
2rduA    
 more ...

 

 Cluster 1 contains 14 ligand types

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Ligand Description


 
1. Ligand: GLV × 1
Glyoxylic acid
PDB code: 2nzl(A).


 
2. Ligand: FMN × 16
flavin mononucleotide
Flavin mononucleotide
PDB codes: 2nzl(A), 2rdt(A), 2rdu(A), 2rdw(A), 2w0u(A), 5qic(A), 5qid(A), 5qie(A), 5qif(A), 5qig(A), 5qih(A), 6gmb(A), 6gmc(A), 6w44(A), 6w45(A), 6w4c(A).


 
3. Ligand: GOA × 1
glycolic acid
Glycolic acid
PDB code: 6gmb(A).


 
4. Ligand: C7C × 2
5-[(4-Chlorophenyl)sulfanyl]-1,2,3-Thiadiazole-4- Carboxylate
PDB codes: 2w0u(A), 6gmc(A).


 
5. Ligand: GLV × 1
Glyoxylic acid
PDB code: 2rdu(A).


 
6. Ligand: 2RD × 1
5-(Dodecylthio)-1h-1,2,3-Triazole-4-Carboxylic acid
PDB code: 2rdt(A).


 
7. Ligand: FNR × 1
1-Deoxy-1-(7,8-Dimethyl-2,4-Dioxo-3,4-Dihydro-2h- Benzo[g]pteridin-1-Id-10(5h)-Yl)-5-O-Phosphonato-
D- Ribitol
PDB code: 5qib(A).


 
8. Ligand: GWG × 1
1-Methylindazole-3-Carboxamide
PDB code: 5qih(A).


 
9. Ligand: GX4 × 1
Cyclopropyl-[4-(4-Fluorophenyl)piperazin-1-Yl]methanone
PDB code: 5qic(A).


 
10. Ligand: GX7 × 1
5-(Cyclohexylamino)pyrimidine-2,4(1h,3h)-Dione
PDB code: 5qib(A).


 
11. Ligand: SL7 × 1
5-[[3-[3-(Dimethylamino)-1,2,4-Oxadiazol-5-Yl]-2- Oxidanyl-Phenyl]methylamino]-2~{h}-Indazole-3-
Carboxylic acid
PDB code: 6w4c(A).


 
12. Ligand: SLG × 1
2-Chloranyl-4-[2-[[(6-Chloranyl-1~{h}-Indol-2-Yl) carbonyl-Methyl-Amino]methyl]-5-Fluoranyl-
Phenyl]benzoic acid
PDB code: 6w45(A).


 
13. Ligand: SLJ × 1
5-[Methyl-[(2-Propoxypyridin-3-Yl)methyl]amino]-2~{h}- Indazole-3-Carboxylic acid
PDB code: 6w44(A).


 
14. Ligand: SO4 × 1
Sulfate ion
PDB code: 2rdw(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GWP × 1
2-Cyclopropyl-1~{h}-Imidazole-4-Carboxamide
PDB code: 5qig(A).


 
2. Ligand: GWS × 1
2-Cyclohexyl-~{N}-Pyridin-3-Yl-Ethanamide
PDB code: 5qif(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GWP × 1
2-Cyclopropyl-1~{h}-Imidazole-4-Carboxamide
PDB code: 5qig(A).


 
2. Ligand: GWV × 1
~{N},~{N}-Dimethyl-4-[(Propan-2-Ylamino)methyl]aniline
PDB code: 5qie(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GWY × 1
5-Chloranyl-~{N}-Methyl-~{N}-[[(3~{s})-Oxolan-3- Yl]methyl]pyrimidin-4-Amine
PDB code: 5qid(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 6gmb(A), 6gmc(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 6gmb(A), 6gmc(A).

 

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