Ligand clusters for UniProt code Q9NZD2

Ligand clusters for Q9NZD2: Glycolipid transfer protein from Homo sapiens

		4 ligand clusters Cluster 1. 16 ligand types 39 ligands Cluster 2. 2 ligand types 2 ligands Cluster 3. 1 ligand type 5 ligands Cluster 4. 1 ligand type 1 ligand
Representative protein: 4gxgA

Structures

PDB		Schematic diagram
4gxgA
4gvtA
2evsA
4gixA
4gxdA
		more ...

Cluster 1 contains 16 ligand types

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Ligand		Description
		1. Ligand: GLC × 2 d-glucose Alpha-D-Glucopyranose PDB codes: 2evs(E),
		2. Ligand: 0SG × 5 N-{(2s,3r,4e)-1-[(3,6-Di-O-Sulfo-Beta-D- Galactopyranosyl)oxy]-3-Hydroxyoctadec-4-En-2- Yl}dodecanamide PDB codes: 4ghs(A), 4gix(A), 4gvt(A), 4gxd(A).
		3. Ligand: CIS × 5 (15z)-N-((1s,2r,3e)-2-Hydroxy-1-{[(3-O-Sulfo-Beta-D- Galactopyranosyl)oxy]methyl}heptadec-3- Enyl)tetracos- 15-Enamide PDB codes: 3ric(A), 3rzn(A), 3s0i(A), 4gjq(A),
		4. Ligand: EIS × 5 N-{(2s,3r,4e)-3-Hydroxy-1-[(3-O-Sulfo-Beta-D- Galactopyranosyl)oxy]octadec-4-En-2-Yl}dodecanamide PDB codes: 4gh0(A), 4ghp(A), 4gxg(A), 4h2z(A).
		5. Ligand: HEX × 5 Hexane PDB codes: 1swx(A), 2evs(E), 2evt(A).
		6. Ligand: BGC-GAL × 3 BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose. PDB codes: 1sx6(A), 2eum(A), 2evd(A).
		7. Ligand: D10 × 3 Decane PDB codes: 2eum(A), 2evd(A), 2evs(A).
		8. Ligand: GLC-HEX × 2 GLC=Alpha-D-Glucopyranose, HEX=Hexane. PDB codes: 2evs(A),
		9. Ligand: MYS × 2 Pentadecane PDB codes: 4gh0(A), 4h2z(A).
		10. Ligand: 03F × 1 (9z)-N-[(2s,3r,4e)-1-(Beta-D-Glucopyranosyloxy)-3- Hydroxyoctadec-4-En-2-Yl]octadec-9-Enamide PDB code: 3s0k(A).
		11. Ligand: GAL-SPH-EIC × 1 GAL=Beta-D-Galactopyranose, SPH=Sphingosine, EIC=Linoleic acid. PDB code: 2evl(A).
		12. Ligand: GAL-SPH-NER × 1 GAL=Beta-D-Galactopyranose, SPH=Sphingosine, NER=(15e)-Tetracos-15-Enoic acid. PDB code: 2euk(A).
		13. Ligand: LNK × 1 Pentane PDB code: 2evl(A).
		14. Ligand: SPH-DAO × 1 SPH=Sphingosine, DAO=Lauric acid. PDB code: 2evd(A).
		15. Ligand: SPH-OCA × 1 SPH=Sphingosine, OCA=Octanoic acid (caprylic acid). PDB code: 2eum(A).
		16. Ligand: SPH-OLA × 1 SPH=Sphingosine, OLA=Oleic acid. PDB code: 1sx6(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: HEX × 1 Hexane PDB code: 4gjq(A).
		2. Ligand: MYS × 1 Pentadecane PDB code: 4h2z(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: OCT × 5 N-Octane PDB codes: 1sx6(A), 2euk(A), 2eum(A), 2evd(A), 2evl(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
_Ni		1. Metal: _NI × 1 PDB code: 3s0k(A).