Ligand clusters for UniProt code Q9IH62

Ligand clusters for Q9IH62: Glycoprotein G from Nipah virus

		Top 6 (of 15) ligand clusters Cluster 1. 3 ligand types 5 ligands Cluster 2. 2 ligand types 4 ligands Cluster 3. 4 ligand types 9 ligands Cluster 4. 1 ligand type 3 ligands Cluster 5. 1 ligand type 4 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 3d12A

Structures

PDB		Schematic diagram
3d12A
2vsmA
3d11A
2vwdA
6vy5A

Cluster 1 contains 3 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 2vsm(A), 2vwd(A), 6vy5(A).
		2. Ligand: LXZ-NGA-GL0-BGC-GLC-BGC-GLC × 1 LXZ=2-Acetamido-2-Deoxy-Alpha-D-Idopyranose, NGA=2-Acetamido-2-Deoxy-Beta-D-Galactopyranose, GL0=Beta-D-Gulopyranose, BGC=Beta-D-Glucopyranose, GLC=Alpha-D-Glucopyranose. PDB code: 3d12(A).
		3. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 3d11(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 2 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 2vwd(A), 6vy5(A).
		2. Ligand: NAG-NAG-BMA-BMA-MAN × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 3d11(A), 3d12(A).

Cluster 3 contains 4 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 2vsm(A), 2vwd(A), 6vy5(A).
		2. Ligand: SO4 × 3 Sulfate ion PDB codes: 3d12(A),
		3. Ligand: NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 3d11(A), 3d12(A).
		4. Ligand: GBL × 1 Gamma-Butyrolactone PDB code: 2vwd(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 2vsm(A), 2vwd(A), 6vy5(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG × 4 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 2vwd(A), 3d11(A), 3d12(A), 6vy5(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GBL × 1 Gamma-Butyrolactone PDB code: 2vwd(A).