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Ligand clusters for UniProt code Q9HVM5

Ligand clusters for Q9HVM5: Lipoprotein signal peptidase from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

3 ligand clusters
Cluster 1.
2 ligand types
25 ligands
Cluster 2.
1 ligand type
9 ligands
Cluster 3.
1 ligand type
1 ligand
Representative protein: 5dirA  
JSmol
 

Structures

PDB   Schematic diagram
5dirA    
6fmsA    
6fmsC    
5dirC    
5dirB    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: OLC × 20
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB codes: 5dir(A), 6fms(A),


 
2. Ligand: MLE-IIL-SER-ALO-5BV × 5
MLE=N-Methylleucine, IIL=Iso-Isoleucine, ALO=Allo-Threonine, 5BV=(2r,3r)-3-(Glycyloxy)-2-Methylnonanoic acid.
PDB codes: 5dir(A), 6fms(A),

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: OLC × 9
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB codes: 5dir(A), 6fms(A),

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: OLC × 1
(2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB code: 5dir(B).

 

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