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Ligand clusters for UniProt code Q9FUZ2

Ligand clusters for Q9FUZ2: Peptide deformylase 1B, chloroplastic/mitochondrial from Arabidopsis thaliana

Top 6 (of 10) ligand clusters
Cluster 1.
3 ligand types
20 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
21 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
10 ligands
Representative protein: 3cpmA  
JSmol
 

Structures

PDB   Schematic diagram
3cpmA    
3pn3A    
3m6oA    
3o3jA    
3pn5A    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 15
PDB codes: 3cpm(A), 3m6o(A), 3m6p(A), 3m6q(A), 3m6r(A), 3o3j(A), 3pn2(A), 3pn3(A), 3pn4(A), 3pn5(A), 3pn6(A).


 
2. Ligand: BB2 × 4
Actinonin
PDB codes: 3m6p(A), 3m6q(A), 3m6r(A), 3pn4(A).


 
3. Ligand: BB4 × 1
2-(5-Bromo-1h-Indol-3-Yl)-N-Hydroxyacetamide
PDB code: 3o3j(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: PN3 × 1
Tert-Butyl {(2s)-1-[Formyl(hydroxy)amino]-3- Phenylpropan-2-Yl}carbamate
PDB code: 3pn3(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3cpm(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 21
PDB codes: 3cpm(A), 3m6o(A), 3m6p(A), 3m6q(A), 3m6r(A), 3o3j(A), 3pn2(A), 3pn3(A), 3pn4(A), 3pn5(A), 3pn6(A),

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 2
PDB codes: 3cpm(A), 3o3j(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 10
PDB codes: 3cpm(A), 3m6o(A), 3m6p(A), 3m6q(A), 3o3j(A), 3pn2(A), 3pn3(A), 3pn4(A), 3pn5(A), 3pn6(A).

 

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