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Ligand clusters for UniProt code Q9F5I8
Ligand clusters for Q9F5I8: Iota-carrageenase from Alteromonas macleodii
Top 6 (of 15) ligand clusters
Cluster 1.
2 ligand types
4 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3lmwA
Structures
PDB
Schematic diagram
3lmw
A
1h80
A
1ktw
A
3lmw
B
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
NO3 × 3
Nitrate ion
PDB codes:
3lmw
(A),
2. Ligand:
G4S-DGS-G4S-DGS × 1
G4S
=4-O-Sulfo-Beta-D-Galactopyranose,
DGS
=3,6-Anhydro-2-O-Sulfo-Alpha-D-Galactopyranose.
PDB code:
1ktw
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
G4S-DGS × 1
G4S
=4-O-Sulfo-Beta-D-Galactopyranose,
DGS
=3,6-Anhydro-2-O-Sulfo-Alpha-D-Galactopyranose.
PDB code:
1ktw
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1h80
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1h80
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1h80
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
NO3 × 1
Nitrate ion
PDB code:
3lmw
(A).