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Ligand clusters for UniProt code Q9F5I8

Ligand clusters for Q9F5I8: Iota-carrageenase from Alteromonas macleodii

Top 6 (of 15) ligand clusters
Cluster 1.
2 ligand types
4 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3lmwA  
JSmol
 

Structures

PDB   Schematic diagram
3lmwA    
1h80A    
1ktwA    
3lmwB    

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: NO3 × 3
Nitrate ion
PDB codes: 3lmw(A),


 
2. Ligand: G4S-DGS-G4S-DGS × 1
G4S=4-O-Sulfo-Beta-D-Galactopyranose, DGS=3,6-Anhydro-2-O-Sulfo-Alpha-D-Galactopyranose.
PDB code: 1ktw(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: G4S-DGS × 1
G4S=4-O-Sulfo-Beta-D-Galactopyranose, DGS=3,6-Anhydro-2-O-Sulfo-Alpha-D-Galactopyranose.
PDB code: 1ktw(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1h80(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1h80(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1h80(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: NO3 × 1
Nitrate ion
PDB code: 3lmw(A).

 

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