Ligand clusters for UniProt code Q9ER97

Ligand clusters for Q9ER97: Neuroglobin from Mus musculus

		Top 6 (of 15) ligand clusters Cluster 1. 4 ligand types 45 ligands Cluster 2. 4 ligand types 5 ligands Cluster 3. 3 ligand types 8 ligands Cluster 4. 2 ligand types 7 ligands Cluster 5. 2 ligand types 33 ligands Cluster 6. 1 ligand type 3 ligands
Representative protein: 6h6cA

Structures

PDB		Schematic diagram
6h6cA
6h6jA
6h6iA
6ra6A
6i3tA
		more ...

Cluster 1 contains 4 ligand types

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Ligand		Description
		1. Ligand: HEM × 34 Protoporphyrin IX containing fe PDB codes: 1q1f(A), 2vry(A), 3gk9(A), 3gkt(A), 3gln(A), 4mu5(A), 4nzi(A), 4o1t(A), 4o4t(A), 4o4z(A), 5eet(A), 5eoh(A), 5eqm(A), 5eu2(A), 5ev5(A), 5eyj(A), 5eys(A), 5f0b(A), 5f2a(A), 5mjc(A), 5mjd(A), 5nvi(A), 5nw6(A), 5o17(A), 5o18(A), 5o1k(A), 5o27(A), 6eye(A), 6h5z(A), 6h6c(A), 6h6i(A), 6i40(A), 6r1q(A), 6ra6(A).
		2. Ligand: HEM-CMO × 5 HEM=Protoporphyrin IX containing fe, CMO=Carbon monoxide. PDB codes: 1w92(A), 4o2g(A), 4o35(A), 6h6j(A), 6i3t(A).
		3. Ligand: DIO × 3 1,4-Diethylene dioxide PDB codes: 4o35(A), 5o1k(A), 6h6c(A).
		4. Ligand: PEG × 3 Di(hydroxyethyl)ether PDB codes: 6h6i(A), 6h6j(A), 6ra6(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6h6c(A).
		2. Ligand: ACT × 2 Acetate ion PDB codes: 6i3t(A), 6i40(A).
		3. Ligand: DIO × 1 1,4-Diethylene dioxide PDB code: 6h5z(A).
		4. Ligand: SO4 × 1 Sulfate ion PDB code: 2vry(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: TRS × 3 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB codes: 6h6i(A), 6h6j(A), 6ra6(A).
		2. Ligand: GOL × 2 glycerin Glycerol PDB codes: 6i3t(A), 6i40(A).
		3. Ligand: DIO × 3 1,4-Diethylene dioxide PDB codes: 4o35(A), 5mjc(A), 6h6c(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 6h6i(A), 6h6j(A), 6ra6(A).
		2. Ligand: PEG × 4 Di(hydroxyethyl)ether PDB codes: 6h6i(A), 6h6j(A), 6ra6(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 6i3t(A), 6i40(A).
		2. Ligand: SO4 × 31 Sulfate ion PDB codes: 2vry(A), 3gk9(A), 3gkt(A), 3gln(A), 4mu5(A), 4nzi(A), 4o1t(A), 4o35(A), 4o4t(A), 4o4z(A), 5eet(A), 5eoh(A), 5eqm(A), 5eu2(A), 5ev5(A), 5eyj(A), 5eys(A), 5f0b(A), 5f2a(A), 5mjc(A), 5mjd(A), 5nvi(A), 5nw6(A), 5o17(A), 5o18(A), 5o1k(A), 5o27(A), 6eye(A), 6h5z(A), 6h6c(A), 6r1q(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: PEG × 3 Di(hydroxyethyl)ether PDB codes: 6h6i(A), 6h6j(A), 6ra6(A).