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Ligand clusters for UniProt code Q9AMP1
Ligand clusters for Q9AMP1: Chitinase A from Vibrio harveyi
5 ligand clusters
Cluster 1.
10 ligand types
39 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
7 ligands
Cluster 5.
1 ligand type
3 ligands
Representative protein: 3aroA
Structures
PDB
Schematic diagram
3aro
A
3arw
A
3arq
A
3arv
A
3arx
A
more ...
Cluster 1 contains 10 ligand types
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Ligand
Description
1. Ligand:
GOL × 11
glycerin
Glycerol
PDB codes:
3arp
(A),
3arq
(A),
3art
(A),
3arv
(A),
3arw
(A),
3ary
(A),
3arz
(A),
3as0
(A),
3as1
(A),
3as3
(A).
2. Ligand:
PNX × 5
pentoxifylline
3,7-Dimethyl-1-(5-Oxohexyl)-3,7-Dihydro-1h-Purine-2,6- Dione
PDB codes:
3arr
(A),
3aru
(A),
3. Ligand:
DEQ × 3
dequalinium
Dequalinium
PDB codes:
3arp
(A),
3art
(A),
4. Ligand:
DM5 × 1
idarubicin
Idarubicin
PDB code:
3arq
(A).
5. Ligand:
I5I × 6
2-(5-Isothiocyanato-1-Benzofuran-2-Yl)-4,5-Dihydro-1h- Imidazole
PDB codes:
3ary
(A),
3arz
(A),
3as3
(A),
6. Ligand:
POY × 4
3-Methyl-1-(5-Oxohexyl)-7-Propyl-3,7-Dihydro-1h-Purine- 2,6-Dione
PDB codes:
3arx
(A),
3as2
(A),
7. Ligand:
SAU × 4
13-Methyl[1,3]benzodioxolo[5,6-C][1,3]dioxolo[4,5- I]phenanthridin-13-Ium
PDB codes:
3arv
(A),
3as0
(A),
8. Ligand:
CTI × 3
1,2-Dimethoxy-12-Methyl[1,3]benzodioxolo[5,6- C]phenanthridin-12-Ium
PDB codes:
3arw
(A),
3as1
(A),
9. Ligand:
NAG-NAG-NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
3b9d
(A).
10. Ligand:
NAG-NAG-NAG-NAG-NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
3b9a
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
DEQ × 1
dequalinium
Dequalinium
PDB code:
3art
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
POY × 1
3-Methyl-1-(5-Oxohexyl)-7-Propyl-3,7-Dihydro-1h-Purine- 2,6-Dione
PDB code:
3as2
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 7
glycerin
Glycerol
PDB codes:
3aro
(A),
3arp
(A),
3arq
(A),
3arv
(A),
3arw
(A),
3arx
(A),
3ary
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
3arp
(A),
3arq
(A),
3arv
(A).