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Ligand clusters for UniProt code Q9AMP1

Ligand clusters for Q9AMP1: Chitinase A from Vibrio harveyi

5 ligand clusters
Cluster 1.
10 ligand types
39 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
7 ligands
Cluster 5.
1 ligand type
3 ligands
Representative protein: 3aroA  
JSmol
 

Structures

PDB   Schematic diagram
3aroA    
3arwA    
3arqA    
3arvA    
3arxA    
 more ...

 

 Cluster 1 contains 10 ligand types

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Ligand Description


 
1. Ligand: GOL × 11
glycerin
Glycerol
PDB codes: 3arp(A), 3arq(A), 3art(A), 3arv(A), 3arw(A), 3ary(A), 3arz(A), 3as0(A), 3as1(A), 3as3(A).


 
2. Ligand: PNX × 5
pentoxifylline
3,7-Dimethyl-1-(5-Oxohexyl)-3,7-Dihydro-1h-Purine-2,6- Dione
PDB codes: 3arr(A), 3aru(A),


 
3. Ligand: DEQ × 3
dequalinium
Dequalinium
PDB codes: 3arp(A), 3art(A),


 
4. Ligand: DM5 × 1
idarubicin
Idarubicin
PDB code: 3arq(A).


 
5. Ligand: I5I × 6
2-(5-Isothiocyanato-1-Benzofuran-2-Yl)-4,5-Dihydro-1h- Imidazole
PDB codes: 3ary(A), 3arz(A), 3as3(A),


 
6. Ligand: POY × 4
3-Methyl-1-(5-Oxohexyl)-7-Propyl-3,7-Dihydro-1h-Purine- 2,6-Dione
PDB codes: 3arx(A), 3as2(A),


 
7. Ligand: SAU × 4
13-Methyl[1,3]benzodioxolo[5,6-C][1,3]dioxolo[4,5- I]phenanthridin-13-Ium
PDB codes: 3arv(A), 3as0(A),


 
8. Ligand: CTI × 3
1,2-Dimethoxy-12-Methyl[1,3]benzodioxolo[5,6- C]phenanthridin-12-Ium
PDB codes: 3arw(A), 3as1(A),


 
9. Ligand: NAG-NAG-NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 3b9d(A).


 
10. Ligand: NAG-NAG-NAG-NAG-NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 3b9a(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: DEQ × 1
dequalinium
Dequalinium
PDB code: 3art(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: POY × 1
3-Methyl-1-(5-Oxohexyl)-7-Propyl-3,7-Dihydro-1h-Purine- 2,6-Dione
PDB code: 3as2(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 7
glycerin
Glycerol
PDB codes: 3aro(A), 3arp(A), 3arq(A), 3arv(A), 3arw(A), 3arx(A), 3ary(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 3arp(A), 3arq(A), 3arv(A).

 

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