Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q97ML2
Ligand clusters for Q97ML2: Predicted acetyltransferase from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
Top 6 (of 7) ligand clusters
Cluster 1.
8 ligand types
17 ligands
Cluster 2.
2 ligand types
13 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5kf2A
Structures
PDB
Schematic diagram
5kf2
A
5kgj
A
5kf8
A
5kf9
A
5kga
A
more ...
Cluster 1 contains 8 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes:
5kf9
(A),
5kga
(A).
2. Ligand:
COA × 7
Coenzyme a
PDB codes:
5kf1
(A),
5kf2
(A),
5kf8
(A),
5kf9
(A),
5kga
(A),
5kgj
(A),
5kgp
(A).
3. Ligand:
EP1 × 3
3-[4-(2-Hydroxyethyl)piperazin-1-Yl]propane-1-Sulfonic acid
PDB codes:
5kf8
(A),
5kf9
(A),
5kgj
(A).
4. Ligand:
ACO × 1
Acetyl coenzyme A
PDB code:
5kgh
(A).
5. Ligand:
GCS × 1
2-Amino-2-Deoxy-Beta-D-Glucopyranose
PDB code:
5kf8
(A).
6. Ligand:
PA1-GCS × 1
PA1
=2-Amino-2-Deoxy-Alpha-D-Glucopyranose,
GCS
=2-Amino-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
5kgp
(A).
7. Ligand:
PO4 × 1
Phosphate ion
PDB code:
5kf2
(A).
8. Ligand:
X6X × 1
2-Amino-2-Deoxy-Alpha-D-Galactopyranose
PDB code:
5kgj
(A).
Cluster 2 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
ACO × 8
Acetyl coenzyme A
PDB codes:
5kf1
(A),
5kf2
(A),
5kf8
(A),
5kf9
(A),
5kga
(A),
5kgh
(A),
5kgj
(A),
5kgp
(A).
2. Ligand:
EDO × 5
1,2-Ethanediol
PDB codes:
5kf2
(A),
5kf8
(A),
5kf9
(A),
5kgj
(A),
5kgp
(A).
Cluster 3 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
COA × 2
Coenzyme a
PDB codes:
5kga
(A),
5kgp
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EDO × 4
1,2-Ethanediol
PDB codes:
5kf1
(A),
5kgh
(A),
5kgj
(A),
5kgp
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EDO × 4
1,2-Ethanediol
PDB codes:
5kf2
(A),
5kf8
(A),
5kf9
(A),
5kgj
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5kf9
(A).