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Ligand clusters for UniProt code Q97ML2

Ligand clusters for Q97ML2: Predicted acetyltransferase from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)

Top 6 (of 7) ligand clusters
Cluster 1.
8 ligand types
17 ligands
Cluster 2.
2 ligand types
13 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5kf2A  
JSmol
 

Structures

PDB   Schematic diagram
5kf2A    
5kgjA    
5kf8A    
5kf9A    
5kgaA    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 5kf9(A), 5kga(A).


 
2. Ligand: COA × 7
Coenzyme a
PDB codes: 5kf1(A), 5kf2(A), 5kf8(A), 5kf9(A), 5kga(A), 5kgj(A), 5kgp(A).


 
3. Ligand: EP1 × 3
3-[4-(2-Hydroxyethyl)piperazin-1-Yl]propane-1-Sulfonic acid
PDB codes: 5kf8(A), 5kf9(A), 5kgj(A).


 
4. Ligand: ACO × 1
Acetyl coenzyme A
PDB code: 5kgh(A).


 
5. Ligand: GCS × 1
2-Amino-2-Deoxy-Beta-D-Glucopyranose
PDB code: 5kf8(A).


 
6. Ligand: PA1-GCS × 1
PA1=2-Amino-2-Deoxy-Alpha-D-Glucopyranose, GCS=2-Amino-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 5kgp(A).


 
7. Ligand: PO4 × 1
Phosphate ion
PDB code: 5kf2(A).


 
8. Ligand: X6X × 1
2-Amino-2-Deoxy-Alpha-D-Galactopyranose
PDB code: 5kgj(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACO × 8
Acetyl coenzyme A
PDB codes: 5kf1(A), 5kf2(A), 5kf8(A), 5kf9(A), 5kga(A), 5kgh(A), 5kgj(A), 5kgp(A).


 
2. Ligand: EDO × 5
1,2-Ethanediol
PDB codes: 5kf2(A), 5kf8(A), 5kf9(A), 5kgj(A), 5kgp(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: COA × 2
Coenzyme a
PDB codes: 5kga(A), 5kgp(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 4
1,2-Ethanediol
PDB codes: 5kf1(A), 5kgh(A), 5kgj(A), 5kgp(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 4
1,2-Ethanediol
PDB codes: 5kf2(A), 5kf8(A), 5kf9(A), 5kgj(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5kf9(A).

 

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