Ligand clusters for UniProt code Q939D2

Ligand clusters for Q939D2: Catalase-peroxidase OS=Burkholderia pseudomallei (strain K96243) GN=katG PE=1 SV=3

		Top 6 (of 9) ligand clusters Cluster 1. 3 ligand types 17 ligands Cluster 2. 2 ligand types 14 ligands Cluster 3. 2 ligand types 7 ligands Cluster 4. 2 ligand types 7 ligands Cluster 5. 2 ligand types 12 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 2dv1A

Structures

PDB		Schematic diagram
2dv1A
6mq0A
6mq1A
3n3rA
3n3qA
		more ...

Cluster 1 contains 3 ligand types

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Ligand		Description
		1. Ligand: HEM × 15 Protoporphyrin IX containing fe PDB codes: 2dv1(A), 2dv2(A), 3n3o(A), 3n3p(A), 3n3q(A), 3n3r(A), 3n3s(A), 4ka5(A), 4ka6(A), 4qzl(A), 4qzp(A), 6cfq(A), 6mpy(A), 6mq0(A), 6mq1(A).
		2. Ligand: HEM-CYN × 1 HEM=Protoporphyrin IX containing fe, CYN=Cyanide ion. PDB code: 4qzj(A).
		3. Ligand: NIZ × 1 Pyridine-4-Carbohydrazide PDB code: 4ka6(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: MPD × 9 (4s)-2-Methyl-2,4-Pentanediol PDB codes: 4ka5(A), 4ka6(A), 4qzj(A), 4qzl(A), 4qzp(A), 6cfq(A), 6mpy(A), 6mq0(A), 6mq1(A).
		2. Ligand: MRD × 5 (4r)-2-Methylpentane-2,4-Diol PDB codes: 3n3o(A), 3n3p(A), 3n3q(A), 3n3r(A), 3n3s(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: PO4 × 6 Phosphate ion PDB codes: 2dv1(A), 3n3p(A), 6cfq(A), 6mpy(A), 6mq0(A), 6mq1(A).
		2. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 4qzp(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
_Cl		1. Metal: _CL × 6 PDB codes: 3n3o(A), 3n3q(A), 3n3s(A), 4ka5(A), 4ka6(A), 4qzl(A).
		2. Ligand: NIZ × 1 Pyridine-4-Carbohydrazide PDB code: 3n3q(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
_Cl		1. Metal: _CL × 10 PDB codes: 3n3o(A), 3n3p(A), 3n3q(A), 3n3r(A), 3n3s(A), 4ka5(A), 4ka6(A), 4qzj(A), 4qzl(A), 4qzp(A).
		2. Ligand: NIZ × 2 Pyridine-4-Carbohydrazide PDB codes: 3n3q(A), 4ka6(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: TRS × 1 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB code: 2dv2(A).