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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q92541
Ligand clusters for Q92541: RNA polymerase-associated protein RTF1 homolog from Homo sapiens
Top 6 (of 13) ligand clusters
Cluster 1.
3 ligand types
5 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4l1uB
Structures
PDB
Schematic diagram
4l1u
B
3u1u
A
4l1p
B
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4l1p
(B),
2. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
3u1u
(A),
4l1u
(B).
3. Ligand:
GLY-SER-ARG-TPO-PRO-MET-TYR-GLY × 1
TPO
=Phosphothreonine.
PDB code:
4l1u
(B).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3u1u
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4l1p
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4l1p
(B).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4l1u
(B).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3u1u
(A).