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EBI
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PDBsum
Ligand clusters for UniProt code Q91XW9
Ligand clusters for Q91XW9: Pcdhgc5 protein from Mus musculus
6 ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
4 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4zpnA
Structures
PDB
Schematic diagram
4zpn
A
4zpq
A
4zpo
A
4zpp
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
NAG-FUC × 2
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
FUC
=Alpha-L-Fucopyranose.
PDB codes:
4zpo
(A),
4zpq
(A).
2. Ligand:
NAG-NAG × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code:
4zpp
(A).
3. Ligand:
NAG-NAG-FUC × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
FUC
=Alpha-L-Fucopyranose.
PDB code:
4zpn
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
MAN × 4
Alpha-D-Mannopyranose
PDB codes:
4zpn
(A),
4zpo
(A),
4zpp
(A),
4zpq
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
MAN × 3
Alpha-D-Mannopyranose
PDB codes:
4zpn
(A),
4zpp
(A),
4zpq
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
MAN × 4
Alpha-D-Mannopyranose
PDB codes:
4zpn
(A),
4zpo
(A),
4zpp
(A),
4zpq
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
MAN × 3
Alpha-D-Mannopyranose
PDB codes:
4zpn
(A),
4zpp
(A),
4zpq
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
4zpo
(A).