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Ligand clusters for UniProt code Q8WXF7

Ligand clusters for Q8WXF7: Atlastin-1 from Homo sapiens

Top 6 (of 10) ligand clusters
Cluster 1.
5 ligand types
27 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4idnA  
JSmol
 

Structures

PDB   Schematic diagram
4idnA    
3q5dA    
3qnuA    
6b9fA    
4idoA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 13
PDB codes: 3q5d(A), 3q5e(A), 3qnu(A), 3qof(A), 4idn(A), 4ido(A), 4idp(A), 4idq(A), 6b9d(A), 6b9e(A), 6b9f(A), 6b9g(B).


 
2. Ligand: GDP × 9
Guanosine-5'-Diphosphate
PDB codes: 3q5d(A), 3q5e(A), 3qnu(A), 3qof(A), 6b9d(A), 6b9e(A), 6b9f(A), 6b9g(B).


 
3. Ligand: GDP-ALF × 2
GDP=Guanosine-5'-Diphosphate, ALF=Tetrafluoroaluminate ion.
PDB codes: 4ido(A), 4idq(A).


 
4. Ligand: GNP × 2
Phosphoaminophosphonic acid-Guanylate ester
PDB codes: 4idn(A), 4idp(A).


 
5. Ligand: ALF × 1
Tetrafluoroaluminate ion
PDB code: 6b9f(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: P6G × 1
Hexaethylene glycol
PDB code: 4idq(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: P6G × 1
Hexaethylene glycol
PDB code: 4idq(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6b9d(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6b9d(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6b9d(A).

 

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