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Ligand clusters for UniProt code Q8WUI4
Ligand clusters for Q8WUI4: Histone deacetylase 7 from Homo sapiens
4 ligand clusters
Cluster 1.
5 ligand types
14 ligands
Cluster 2.
1 ligand type
8 ligands
Cluster 3.
1 ligand type
8 ligands
Cluster 4.
1 ligand type
8 ligands
Representative protein: 3c0yA
Structures
PDB
Schematic diagram
3c0y
A
3znr
A
3c10
A
3c0z
A
3zns
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 8
PDB codes:
3c0y
(A),
3c0z
(A),
3c10
(A),
3znr
(A),
3zns
(A).
2. Ligand:
SHH × 2
vorinostat
Octanedioic acid hydroxyamide phenylamide
PDB codes:
3c0z
(A),
3. Ligand:
TSN × 2
Trichostatin a
PDB codes:
3c10
(A),
4. Ligand:
NU7 × 1
N-{[1-Methyl-4-(4-Phenyl-1,3-Thiazol-2-Yl) piperidin-4-Yl]methyl}-3-[5-(Trifluoromethyl)-1, 2,4-
Oxadiazol-3-Yl]benzamide
PDB code:
3zns
(A).
5. Ligand:
NU9 × 1
N-{[4-(4-Phenyl-1,3-Thiazol-2-Yl)tetrahydro- 2h-Pyran-4-Yl]methyl}-3-[5-(Trifluoromethyl)- 1,2,4-
Oxadiazol-3-Yl]benzamide
PDB code:
3znr
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
__K
1. Metal:
__K × 8
PDB codes:
3c0y
(A),
3c0z
(A),
3c10
(A),
3znr
(A),
3zns
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 8
PDB codes:
3c0y
(A),
3c0z
(A),
3c10
(A),
3znr
(A),
3zns
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
__K
1. Metal:
__K × 8
PDB codes:
3c0y
(A),
3c0z
(A),
3c10
(A),
3znr
(A),
3zns
(A).