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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q8TCD0
Ligand clusters for Q8TCD0: Uncharacterized protein from Homo sapiens
Top 6 (of 16) ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
3 ligand types
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3mnvA
Structures
PDB
Schematic diagram
3mnv
A
4nug
L
4nwt
L
3cfj
L
3cfk
L
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
MES × 2
2-(N-Morpholino)-Ethanesulfonic acid
PDB codes:
4nwt
(L),
2. Ligand:
ACT × 1
Acetate ion
PDB code:
4nwt
(L).
3. Ligand:
P6G × 1
Hexaethylene glycol
PDB code:
4nug
(L).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3cfj
(L).
2. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
3mnv
(A),
6dc4
(L).
3. Ligand:
ACT × 1
Acetate ion
PDB code:
4nwt
(L).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
3mnv
(A),
6arp
(C).
2. Ligand:
ACT × 1
Acetate ion
PDB code:
4nwt
(L).
3. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6dc4
(L).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PGE × 1
Triethylene glycol
PDB code:
4nwt
(L).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6arp
(C).
2. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
6dc4
(L),
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6arp
(C).