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Ligand clusters for UniProt code Q8RDB0

Ligand clusters for Q8RDB0: Carbamoyltransferase from Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)

Top 6 (of 13) ligand clusters
Cluster 1.
2 ligand types
4 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 3vthA  
JSmol
 

Structures

PDB   Schematic diagram
3vthA    
3vtiA    
3vthB    

 

 Cluster 1 contains 2 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 2
PDB codes: 3vth(A),


 
2. Ligand: APC × 2
Diphosphomethylphosphonic acid adenosyl ester
PDB codes: 3vth(A),

 

 Cluster 2 contains 2 ligand types

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Ligand Description

_Fe
 
1. Metal: _FE × 3
PDB codes: 3vth(A), 3vti(A).


 
2. Ligand: AP2 × 2
Phosphomethylphosphonic acid adenosyl ester
PDB codes: 3vth(A),

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3vth(A).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 3vth(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3vth(A),

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 3vth(A),

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 2
Phosphate ion
PDB codes: 3vth(A),

 

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