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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q8P9V9
Ligand clusters for Q8P9V9: Peroxiredoxin Bcp from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
Top 6 (of 12) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3gknA
Structures
PDB
Schematic diagram
3gkn
A
3gkk
A
5ipg
A
5iow
A
5im9
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3gkn
(A).
2. Ligand:
BIH × 1
Naphthalene-2,6-Disulfonic acid
PDB code:
3gkn
(A).
3. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3gkk
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3gkn
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3gkn
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3gkn
(A).
Cluster 5 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3gkn
(A).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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invert selection.
Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3gkk
(A).