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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q8L5H4
Ligand clusters for Q8L5H4: Lectin from Musa acuminata
Top 6 (of 7) ligand clusters
Cluster 1.
4 ligand types
5 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1x1vA
Structures
PDB
Schematic diagram
1x1v
A
3mit
A
3miu
A
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
HEZ × 2
Hexane-1,6-Diol
PDB codes:
1x1v
(A),
3mit
(A).
2. Ligand:
MAN × 1
Alpha-D-Mannopyranose
PDB code:
3mit
(A).
3. Ligand:
MAN-MAN × 1
MAN
=Alpha-D-Mannopyranose.
PDB code:
3miu
(A).
4. Ligand:
MMA × 1
Methyl alpha-D-Mannopyranoside
PDB code:
1x1v
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
MAN × 2
Alpha-D-Mannopyranose
PDB codes:
3mit
(A),
3miu
(A).
2. Ligand:
MMA × 1
Methyl alpha-D-Mannopyranoside
PDB code:
1x1v
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
MAN × 2
Alpha-D-Mannopyranose
PDB codes:
3mit
(A),
3miu
(A).
2. Ligand:
MMA × 1
Methyl alpha-D-Mannopyranoside
PDB code:
1x1v
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
HEZ × 3
Hexane-1,6-Diol
PDB codes:
1x1v
(A),
3mit
(A),
3miu
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
HEZ × 3
Hexane-1,6-Diol
PDB codes:
1x1v
(A),
3mit
(A),
3miu
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 2
PDB codes:
1x1v
(A),
3miu
(A).