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EBI
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PDBsum
Ligand clusters for UniProt code Q8IWV8
Ligand clusters for Q8IWV8: E3 ubiquitin-protein ligase UBR2 from Homo sapiens
Top 6 (of 7) ligand clusters
Cluster 1.
5 ligand types
5 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
6 ligands
Cluster 6.
1 ligand type
6 ligands
Representative protein: 3ny2A
Structures
PDB
Schematic diagram
3ny2
A
5um3
A
3ny3
A
5tdb
A
5tdd
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
ARG-ILE-PHE-SER × 1
PDB code:
3ny3
(A).
2. Ligand:
ARG-LEU × 1
PDB code:
5tda
(A).
3. Ligand:
DA2-ILE × 1
DA2
=Ng,Ng-Dimethyl-L-Arginine.
PDB code:
5tdb
(A).
4. Ligand:
HIS-ILE-PHE-SER × 1
PDB code:
5tdd
(A).
5. Ligand:
TRP × 1
PDB code:
5tda
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5tdb
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5tdd
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5tdd
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 6
PDB codes:
3ny2
(A),
3ny3
(A),
5tda
(A),
5tdb
(A),
5tdd
(A),
5um3
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 6
PDB codes:
3ny2
(A),
3ny3
(A),
5tda
(A),
5tdb
(A),
5tdd
(A),
5um3
(A).