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Ligand clusters for UniProt code Q8GCA8

Ligand clusters for Q8GCA8: Porphobilinogen deaminase from Bacillus megaterium

2 ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
1 ligand type
2 ligands
Representative protein: 4mlvA  
JSmol
 

Structures

PDB   Schematic diagram
4mlvA    
5ov5A    
5ov6A    
4mlqA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: DPM × 3
3-[5-{[3-(2-Carboxyethyl)-4-(Carboxymethyl)-5-Methyl- 1h-Pyrrol-2-Yl]methyl}-4-(Carboxymethyl)-1h-
Pyrrol-3- Yl]propanoic acid
PDB codes: 4mlq(A), 4mlv(A), 5ov5(A).


 
2. Ligand: 29P × 2
3-[(5s)-5-{[3-(2-Carboxyethyl)-4-(Carboxymethyl)-5- Methyl-1h-Pyrrol-2-Yl]methyl}-4-
(Carboxymethyl)-2-Oxo- 2,5-Dihydro-1h-Pyrrol-3-Yl]propanoic acid
PDB codes: 4mlq(A), 4mlv(A).


 
3. Ligand: AWQ × 1
3-[4-(2-Hydroxy-2-Oxoethyl)-2,5-Dimethyl-1~{h}-Pyrrol- 3-Yl]propanoic acid
PDB code: 5ov6(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACY × 2
acetic acid
Acetic acid
PDB codes: 4mlq(A), 4mlv(A).

 

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