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Ligand clusters for UniProt code Q8GCA8
Ligand clusters for Q8GCA8: Porphobilinogen deaminase from Bacillus megaterium
2 ligand clusters
Cluster 1.
3 ligand types
6 ligands
Cluster 2.
1 ligand type
2 ligands
Representative protein: 4mlvA
Structures
PDB
Schematic diagram
4mlv
A
5ov5
A
5ov6
A
4mlq
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
DPM × 3
3-[5-{[3-(2-Carboxyethyl)-4-(Carboxymethyl)-5-Methyl- 1h-Pyrrol-2-Yl]methyl}-4-(Carboxymethyl)-1h-
Pyrrol-3- Yl]propanoic acid
PDB codes:
4mlq
(A),
4mlv
(A),
5ov5
(A).
2. Ligand:
29P × 2
3-[(5s)-5-{[3-(2-Carboxyethyl)-4-(Carboxymethyl)-5- Methyl-1h-Pyrrol-2-Yl]methyl}-4-
(Carboxymethyl)-2-Oxo- 2,5-Dihydro-1h-Pyrrol-3-Yl]propanoic acid
PDB codes:
4mlq
(A),
4mlv
(A).
3. Ligand:
AWQ × 1
3-[4-(2-Hydroxy-2-Oxoethyl)-2,5-Dimethyl-1~{h}-Pyrrol- 3-Yl]propanoic acid
PDB code:
5ov6
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACY × 2
acetic acid
Acetic acid
PDB codes:
4mlq
(A),
4mlv
(A).