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Ligand clusters for UniProt code Q72KM1

Ligand clusters for Q72KM1: Uroporphyrinogen-III synthase from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)

6 ligand clusters
Cluster 1.
4 ligand types
4 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3d8rA  
JSmol
 

Structures

PDB   Schematic diagram
3d8rA    
3d8tA    
3d8sA    
3d8nA    

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3d8s(A).


 
2. Ligand: ACT × 1
Acetate ion
PDB code: 3d8t(A).


 
3. Ligand: PO4 × 1
Phosphate ion
PDB code: 3d8r(A).


 
4. Ligand: UP3 × 1
3,3',3'',3'''-[3,8,13,17-Tetrakis(carboxymethyl) porphyrin-2,7,12,18-Tetrayl]tetrapropanoic acid
PDB code: 3d8n(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3d8r(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3d8r(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3d8r(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 1
Acetate ion
PDB code: 3d8t(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 1
Acetate ion
PDB code: 3d8t(A).

 

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