Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q6WY08
Ligand clusters for Q6WY08: Anti-tumor lectin (Fragment) from Agrocybe aegerita
4 ligand clusters
Cluster 1.
7 ligand types
16 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 2zgoA
Structures
PDB
Schematic diagram
2zgo
A
3wg3
A
1ww4
A
1ww6
A
3wg1
A
more ...
Cluster 1 contains 7 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
A2G-GAL × 4
A2G
=2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose,
GAL
=Beta-D-Galactopyranose.
PDB codes:
3afk
(A),
3m3c
(A),
3m3e
(A),
3m3o
(A).
2. Ligand:
BGC-GAL × 4
BGC
=Beta-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose.
PDB codes:
1ww6
(A),
2zgm
(A),
2zgo
(A),
3wg1
(A).
3. Ligand:
NAG-GAL-FUC-A2G × 3
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose,
FUC
=Alpha-L-Fucopyranose,
A2G
=2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose.
PDB codes:
3wg3
(A),
3wg4
(A).
4. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
1ww7
(A),
2zgm
(A).
5. Ligand:
BGC-GAL-NGA-GAL-SIA × 1
BGC
=Beta-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose,
NGA
=2-Acetamido-2-Deoxy-Beta-D-Galactopyranose,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
3m3q
(A).
6. Ligand:
BGC-GAL-SIA × 1
BGC
=Beta-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
1ww4
(A).
7. Ligand:
BGC-SGA × 1
BGC
=Beta-D-Glucopyranose,
SGA
=3-O-Sulfo-Beta-D-Galactopyranose.
PDB code:
1ww5
(A).
Cluster 2 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
PEG × 3
Di(hydroxyethyl)ether
PDB codes:
3wg3
(A),
3wg4
(A).
2. Ligand:
PGE × 1
Triethylene glycol
PDB code:
3wg2
(A).
Cluster 3 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
BTB × 1
2-[Bis-(2-Hydroxy-Ethyl)-Amino]-2-Hydroxymethyl- Propane-1,3-Diol
PDB code:
3m3o
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3wg3
(A).