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Ligand clusters for UniProt code Q6WY08

Ligand clusters for Q6WY08: Anti-tumor lectin (Fragment) from Agrocybe aegerita

4 ligand clusters
Cluster 1.
7 ligand types
16 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 2zgoA  
JSmol
 

Structures

PDB   Schematic diagram
2zgoA    
3wg3A    
1ww4A    
1ww6A    
3wg1A    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: A2G-GAL × 4
A2G=2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose, GAL=Beta-D-Galactopyranose.
PDB codes: 3afk(A), 3m3c(A), 3m3e(A), 3m3o(A).


 
2. Ligand: BGC-GAL × 4
BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose.
PDB codes: 1ww6(A), 2zgm(A), 2zgo(A), 3wg1(A).


 
3. Ligand: NAG-GAL-FUC-A2G × 3
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose, FUC=Alpha-L-Fucopyranose, A2G=2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose.
PDB codes: 3wg3(A), 3wg4(A).


 
4. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1ww7(A), 2zgm(A).


 
5. Ligand: BGC-GAL-NGA-GAL-SIA × 1
BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose, NGA=2-Acetamido-2-Deoxy-Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 3m3q(A).


 
6. Ligand: BGC-GAL-SIA × 1
BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 1ww4(A).


 
7. Ligand: BGC-SGA × 1
BGC=Beta-D-Glucopyranose, SGA=3-O-Sulfo-Beta-D-Galactopyranose.
PDB code: 1ww5(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: PEG × 3
Di(hydroxyethyl)ether
PDB codes: 3wg3(A), 3wg4(A).


 
2. Ligand: PGE × 1
Triethylene glycol
PDB code: 3wg2(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: BTB × 1
2-[Bis-(2-Hydroxy-Ethyl)-Amino]-2-Hydroxymethyl- Propane-1,3-Diol
PDB code: 3m3o(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3wg3(A).

 

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