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Ligand clusters for UniProt code Q6N8W4
Ligand clusters for Q6N8W4: Putative branched-chain amino acid transport system substrate-binding protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Top 6 (of 11) ligand clusters
Cluster 1.
5 ligand types
6 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4jb0A
Structures
PDB
Schematic diagram
4jb0
A
3tx6
A
4f8j
A
4fb4
A
4jb2
A
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4jb2
(A),
2. Ligand:
DHC × 1
Caffeic acid
PDB code:
4fb4
(A).
3. Ligand:
ENO × 1
3-(4-Hydroxy-Phenyl)pyruvic acid
PDB code:
3tx6
(A).
4. Ligand:
FER-ENO × 1
FER
=3-(4-Hydroxy-3-Methoxyphenyl)-2-Propenoic acid,
ENO
=3-(4-Hydroxy-Phenyl)pyruvic acid.
PDB code:
4jb0
(A).
5. Ligand:
HC4 × 1
4'-Hydroxycinnamic acid
PDB code:
4f8j
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code:
4f8j
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4f8j
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
3tx6
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4f8j
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4f8j
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
4f8j
(A),
4fb4
(A),
4jb0
(A),
4jb2
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4jb2
(A).