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Ligand clusters for UniProt code Q6N8W4

Ligand clusters for Q6N8W4: Putative branched-chain amino acid transport system substrate-binding protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)

Top 6 (of 11) ligand clusters
Cluster 1.
5 ligand types
6 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
4 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4jb0A  
JSmol
 

Structures

PDB   Schematic diagram
4jb0A    
3tx6A    
4f8jA    
4fb4A    
4jb2A    

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 4jb2(A),


 
2. Ligand: DHC × 1
Caffeic acid
PDB code: 4fb4(A).


 
3. Ligand: ENO × 1
3-(4-Hydroxy-Phenyl)pyruvic acid
PDB code: 3tx6(A).


 
4. Ligand: FER-ENO × 1
FER=3-(4-Hydroxy-3-Methoxyphenyl)-2-Propenoic acid, ENO=3-(4-Hydroxy-Phenyl)pyruvic acid.
PDB code: 4jb0(A).


 
5. Ligand: HC4 × 1
4'-Hydroxycinnamic acid
PDB code: 4f8j(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code: 4f8j(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4f8j(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 3tx6(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4f8j(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 4f8j(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 4f8j(A), 4fb4(A), 4jb0(A), 4jb2(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4jb2(A).

 

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