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EBI
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Ligand clusters for UniProt code Q6GIL8
Ligand clusters for Q6GIL8: Glyceraldehyde-3-phosphate dehydrogenase 1 from Staphylococcus aureus (strain MRSA252)
Top 6 (of 8) ligand clusters
Cluster 1.
5 ligand types
20 ligands
Cluster 2.
1 ligand type
10 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3lvfP
Structures
PDB
Schematic diagram
3lvf
P
3vaz
P
3k73
Q
3lc1
P
5t73
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
3k9q
(Q),
3lc2
(O),
3lc7
(O).
2. Ligand:
NAD × 10
Nicotinamide-Adenine-Dinucleotide
PDB codes:
3hq4
(R),
3k73
(Q),
3k9q
(Q),
3ksd
(Q),
3ksz
(O),
3kv3
(O),
3l4s
(Q),
3lc1
(P),
3lvf
(P),
3vaz
(P).
3. Ligand:
3PG × 3
3-Phosphoglyceric acid
PDB codes:
3ksz
(O),
3kv3
(O),
3l4s
(Q).
4. Ligand:
PO4 × 3
Phosphate ion
PDB codes:
3k73
(Q),
3l6o
(Q).
5. Ligand:
G3H × 1
Glyceraldehyde-3-Phosphate
PDB code:
3lc2
(O).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
NAD × 10
Nicotinamide-Adenine-Dinucleotide
PDB codes:
3hq4
(R),
3k73
(Q),
3k9q
(Q),
3ksd
(Q),
3ksz
(O),
3kv3
(O),
3l4s
(Q),
3lc1
(P),
3lvf
(P),
3vaz
(P).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3lc1
(P).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3vaz
(P).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3vaz
(P).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3vaz
(P).