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Ligand clusters for UniProt code Q6GIL8

Ligand clusters for Q6GIL8: Glyceraldehyde-3-phosphate dehydrogenase 1 from Staphylococcus aureus (strain MRSA252)

Top 6 (of 8) ligand clusters
Cluster 1.
5 ligand types
20 ligands
Cluster 2.
1 ligand type
10 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3lvfP  
JSmol
 

Structures

PDB   Schematic diagram
3lvfP    
3vazP    
3k73Q    
3lc1P    
5t73A    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 3k9q(Q), 3lc2(O), 3lc7(O).


 
2. Ligand: NAD × 10
Nicotinamide-Adenine-Dinucleotide
PDB codes: 3hq4(R), 3k73(Q), 3k9q(Q), 3ksd(Q), 3ksz(O), 3kv3(O), 3l4s(Q), 3lc1(P), 3lvf(P), 3vaz(P).


 
3. Ligand: 3PG × 3
3-Phosphoglyceric acid
PDB codes: 3ksz(O), 3kv3(O), 3l4s(Q).


 
4. Ligand: PO4 × 3
Phosphate ion
PDB codes: 3k73(Q), 3l6o(Q).


 
5. Ligand: G3H × 1
Glyceraldehyde-3-Phosphate
PDB code: 3lc2(O).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAD × 10
Nicotinamide-Adenine-Dinucleotide
PDB codes: 3hq4(R), 3k73(Q), 3k9q(Q), 3ksd(Q), 3ksz(O), 3kv3(O), 3l4s(Q), 3lc1(P), 3lvf(P), 3vaz(P).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 3lc1(P).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3vaz(P).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3vaz(P).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3vaz(P).

 

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