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Ligand clusters for UniProt code Q62230
Ligand clusters for Q62230: Sialoadhesin from Mus musculus
2 ligand clusters
Cluster 1.
7 ligand types
8 ligands
Cluster 2.
1 ligand type
1 ligand
Representative protein: 1od7A
Structures
PDB
Schematic diagram
1od7
A
1oda
A
2bve
A
1qfo
A
1qfo
C
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
1. Ligand:
SIA × 2
N-Acetyl-Alpha-Neuraminic acid
PDB codes:
1qfo
(C),
1url
(A).
2. Ligand:
BDU × 1
Me-A-9-N-(Biphenyl-4-Carbonyl)-Amino-9-Deoxy- Neu5ac
PDB code:
1oda
(A).
3. Ligand:
BND × 1
Methyl 5-Acetamido-3,5,9-Trideoxy-9-[(Phenylcarbonyl) amino]-D-Glycero-Alpha-D-Galacto-Non-2-
Ulopyranosidonic acid
PDB code:
1od9
(A).
4. Ligand:
GLC-GAL-SIA × 1
GLC
=Alpha-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
1qfo
(A).
5. Ligand:
GLY-HIS-THR-TRP-GLY-HIA × 1
HIA
=L-Histidine amide.
PDB code:
1url
(A).
6. Ligand:
PH5 × 1
Benzyl 3,5-Dideoxy-5-(Propanoylamino)-D-Glycero-Alpha- D-Galacto-Non-2-Ulopyranosidonic acid
PDB code:
2bve
(A).
7. Ligand:
SUW × 1
Me-A-9-N-(Naphthyl-2-Carbonyl)-Amino-9-Deoxy- Neu5ac
PDB code:
1od7
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1od9
(A).