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EBI
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Structure Databases
PDBsum
Ligand clusters for UniProt code Q5SQI0
Ligand clusters for Q5SQI0: Alpha-tubulin N-acetyltransferase 1 from Homo sapiens
5 ligand clusters
Cluster 1.
6 ligand types
15 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
1 ligand
Representative protein: 3vwdA
Structures
PDB
Schematic diagram
3vwd
A
4u9y
A
4pk3
A
4pk2
A
4b5p
A
more ...
Cluster 1 contains 6 ligand types
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Ligand
Description
1. Ligand:
ACO × 5
Acetyl coenzyme A
PDB codes:
3vwd
(A),
4b5o
(A),
4b5p
(A),
4gs4
(A),
4if5
(A).
2. Ligand:
COA × 5
Coenzyme a
PDB codes:
3vwe
(A),
4pk2
(A),
4pk3
(A),
4u9y
(A),
4u9z
(A).
_Na
3. Metal:
_NA × 2
PDB codes:
4b5o
(A),
4b5p
(A).
4. Ligand:
ACE-SER-ASP-ALY-THR-NH2 × 1
ACE
=Acetyl group,
ALY
=N(6)-Acetyllysine,
NH2
=Amino group.
PDB code:
4pk3
(A).
5. Ligand:
ACE-SER-ASP-PRK-THR-NH2 × 1
ACE
=Acetyl group,
PRK
=N~6~-Propanoyl-L-Lysine,
NH2
=Amino group.
PDB code:
4pk2
(A).
_Cl
6. Metal:
_CL × 1
PDB code:
3vwd
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACO × 1
Acetyl coenzyme A
PDB code:
4b5p
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
3vwd
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 2
PDB codes:
3vwd
(A),
4if5
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 1
PDB code:
3vwd
(A).