Ligand clusters for UniProt code Q5SLP1

Ligand clusters for Q5SLP1: Ribonuclease TTHA0252 from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)

		Top 6 (of 30) ligand clusters Cluster 1. 6 ligand types 54 ligands Cluster 2. 4 ligand types 13 ligands Cluster 3. 3 ligand types 12 ligands Cluster 4. 2 ligand types 11 ligands Cluster 5. 2 ligand types 2 ligands Cluster 6. 1 ligand type 8 ligands
Representative protein: 2dkfA

Structures

PDB		Schematic diagram
2dkfA
3ie0A
3iekA
3ielA
3ie1A
		more ...

Cluster 1 contains 6 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 16 PDB codes: 2dkf(A), 3a4y(A), 3idz(A), 3ie0(A), 3ie1(A), 3ie2(A), 3iek(A), 3iel(A), 3iem(A),
		2. Ligand: SO4 × 34 Sulfate ion PDB codes: 3a4y(A), 3idz(A), 3ie0(A), 3ie1(A), 3ie2(A), 3iek(A), 3iel(A), 3iem(A),
		3. Ligand: BTB × 1 2-[Bis-(2-Hydroxy-Ethyl)-Amino]-2-Hydroxymethyl- Propane-1,3-Diol PDB code: 3ie2(A).
		4. Ligand: FLC × 1 Citrate anion PDB code: 3ie0(A).
		5. Ligand: SSU-SSU-SSU-SSU-SSU-SSU × 1 SSU=Uridine-5'-Phosphorothioate. PDB code: 3iem(A).
		6. Ligand: U5P × 1 Uridine-5'-Monophosphate PDB code: 3iel(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: SO4 × 9 Sulfate ion PDB codes: 3a4y(A), 3idz(A), 3ie0(A), 3ie1(A), 3ie2(A), 3iek(A), 3iel(A).
		2. Ligand: SSU-SSU-SSU × 2 SSU=Uridine-5'-Phosphorothioate. PDB codes: 3iem(A),
		3. Ligand: FLC × 1 Citrate anion PDB code: 3iel(A).
		4. Ligand: U5P × 1 Uridine-5'-Monophosphate PDB code: 3iel(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: SO4 × 6 Sulfate ion PDB codes: 3a4y(A), 3ie0(A), 3ie1(A), 3ie2(A), 3iel(A).
		2. Ligand: FLC × 5 Citrate anion PDB codes: 3a4y(A), 3idz(A), 3ie0(A), 3ie1(A), 3iek(A).
		3. Ligand: SSU-SSU-SSU-SSU × 1 SSU=Uridine-5'-Phosphorothioate. PDB code: 3iem(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 10 Sulfate ion PDB codes: 3a4y(A), 3idz(A), 3ie0(A), 3ie1(A), 3ie2(A), 3iek(A), 3iem(A).
		2. Ligand: U5P × 1 Uridine-5'-Monophosphate PDB code: 3iel(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: FLC × 1 Citrate anion PDB code: 3ie1(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 3ie2(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 8 Sulfate ion PDB codes: 3a4y(A), 3idz(A), 3ie0(A), 3ie1(A), 3ie2(A), 3iek(A), 3iel(A), 3iem(A).