Ligand clusters for UniProt code Q5SJ80

Ligand clusters for Q5SJ80: Cytochrome c oxidase subunit 2 from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)

		Top 6 (of 9) ligand clusters Cluster 1. 2 ligand types 15 ligands Cluster 2. 1 ligand type 15 ligands Cluster 3. 1 ligand type 15 ligands Cluster 4. 1 ligand type 13 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 5ndcB

Structures

PDB		Schematic diagram
5ndcB
4faaB
3s8fB
4g72B
4gp8B
		more ...

Cluster 1 contains 2 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: BNG × 1 Nonyl beta-D-Glucopyranoside PDB code: 1ehk(B).
		2. Ligand: OLC × 14 (2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate PDB codes: 3s8f(B), 3s8g(B), 4fa7(B), 4faa(B), 4g70(B), 4g71(B), 4g72(B), 4g7q(B), 4g7r(B), 4g7s(B), 4gp4(B), 4gp5(B), 4gp8(B), 4n4y(B).

Cluster 2 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: OLC × 15 (2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate PDB codes: 3s8f(B), 3s8g(B), 4fa7(B), 4faa(B), 4g70(B), 4g71(B), 4g72(B), 4g7q(B), 4g7r(B), 4g7s(B), 4gp4(B), 4gp5(B), 4gp8(B), 4n4y(B), 5ndc(B).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: OLC × 15 (2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate PDB codes: 3s8f(B), 3s8g(B), 4fa7(B), 4faa(B), 4g70(B), 4g71(B), 4g72(B), 4g7q(B), 4g7r(B), 4g7s(B), 4gp4(B), 4gp5(B), 4gp8(B), 4n4y(B), 5ndc(B).

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: OLC × 13 (2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate PDB codes: 3s8f(B), 3s8g(B), 4faa(B), 4g70(B), 4g71(B), 4g72(B), 4g7q(B), 4g7r(B), 4g7s(B), 4gp4(B), 4gp5(B), 4n4y(B), 5ndc(B).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: OLC × 1 (2r)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate PDB code: 3s8g(B).

Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: MPD × 1 (4s)-2-Methyl-2,4-Pentanediol PDB code: 5u7n(F).