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EBI
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PDBsum
Ligand clusters for UniProt code Q58EU8
Ligand clusters for Q58EU8: Igk protein from Mus musculus
5 ligand clusters
Cluster 1.
10 ligand types
16 ligands
Cluster 2.
1 ligand type
3 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
5 ligands
Cluster 5.
1 ligand type
5 ligands
Representative protein: 1kn2L
Structures
PDB
Schematic diagram
1kn2
L
2c1p
A
1yek
L
1rua
L
1nd0
A
more ...
Cluster 1 contains 10 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 5
PDB codes:
1kn2
(L),
1kn4
(L),
1yei
(L),
1yej
(L),
1yek
(L).
2. Ligand:
BEZ × 3
benzoic acid
Benzoic acid
PDB codes:
1ncw
(L),
1rua
(L),
1rum
(L).
3. Ligand:
ACT × 1
Acetate ion
PDB code:
1rua
(L).
4. Ligand:
DP4 × 1
(1s,4s)-4-[Dimethyl(phenyl)silyl]-1-Methylpiperidine 1- Oxide
PDB code:
1nd0
(A).
5. Ligand:
FNZ × 1
PDB code:
2c1p
(A).
6. Ligand:
NPO × 1
P-Nitrophenol
PDB code:
1yek
(L).
7. Ligand:
PDE × 1
Para-Nitrophenyl phosphonobutanoyl d-Alanine
PDB code:
1kn4
(L).
8. Ligand:
PGG × 1
Para-Nitrophenylphosphonobutanoyl-Glycine
PDB code:
1yei
(L).
9. Ligand:
PNE × 1
Para-Nitrophenyl phosphonobutanoyl l-Alanine
PDB code:
1kn2
(L).
10. Ligand:
PNF × 1
6-{4-[Hydroxy-(4-Nitro-Phenoxy)-Phosphoryl]- Butyrylamino}-Hexanoic acid
PDB code:
1yej
(L).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1ncw
(L),
1rua
(L),
1rum
(L).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1ncw
(L),
1rua
(L),
1rum
(L).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 5
PDB codes:
1kn2
(L),
1kn4
(L),
1yei
(L),
1yej
(L),
1yek
(L).
Cluster 5 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
_Zn
1. Metal:
_ZN × 5
PDB codes:
1kn2
(L),
1kn4
(L),
1yei
(L),
1yej
(L),
1yek
(L).