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Ligand clusters for UniProt code Q54276

Ligand clusters for Q54276: Chitinase from Serratia marcescens

Top 6 (of 32) ligand clusters
Cluster 1.
12 ligand types
48 ligands
Cluster 2.
2 ligand types
15 ligands
Cluster 3.
2 ligand types
5 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
7 ligands
Cluster 6.
1 ligand type
6 ligands
Representative protein: 1e6pA  
JSmol
 

Structures

PDB   Schematic diagram
1e6pA    
1w1yA    
1e6rA    
1ur8A    
1w1tA    
 more ...

 

 Cluster 1 contains 12 ligand types

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Ligand Description


 
1. Ligand: GOL × 32
glycerin
Glycerol
PDB codes: 1e6p(A), 1ur8(A), 1ur9(A), 1w1p(A), 1w1t(A), 1w1v(A), 1w1y(A),


 
2. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1ur8(A), 1ur9(A),


 
3. Ligand: TYP × 3
Cyclo-(L-Tyrosine-L-Proline) inhibitor
PDB codes: 1w1y(A),


 
4. Ligand: GDL-NAG × 2
GDL=2-(Acetylamido)-2-Deoxy-D-Glucono-1,5-Lactone, NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB codes: 1ur8(A), 1ur9(A).


 
5. Ligand: ALJ × 1
Cyclo-(L-Arginine-L-Proline) inhibitor
PDB code: 1w1v(A).


 
6. Ligand: AMI × 1
Allosamizoline
PDB code: 1e6r(A).


 
7. Ligand: CHQ × 1
Cyclo-(L-Histidine-L-Proline) inhibitor
PDB code: 1w1t(A).


 
8. Ligand: GIO × 1
Cyclo-(Glycine-L-Proline) inhibitor
PDB code: 1w1p(A).


 
9. Ligand: NAA-NAA × 1
NAA=2-Acetamido-2-Deoxy-Beta-D-Allopyranose.
PDB code: 1e6r(A).


 
10. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 1e6z(A).


 
11. Ligand: NGO × 1
2-Methyl-4,5-Dihydro-(1,2-Dideoxy-Alpha-D- Glucopyranoso)[2,1-D]-1,3-Oxazole
PDB code: 1e6z(A).


 
12. Ligand: PHJ × 1
N-[(Aminooxy)carbonyl]-N-Phenylamine
PDB code: 1ur9(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 14
glycerin
Glycerol
PDB codes: 1e6p(A), 1ur8(A), 1ur9(A), 1w1p(A), 1w1t(A), 1w1v(A), 1w1y(A),


 
2. Ligand: TYP × 1
Cyclo-(L-Tyrosine-L-Proline) inhibitor
PDB code: 1w1y(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1ur8(A), 1ur9(A).


 
2. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1e6r(A), 1ur9(A), 1w1v(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1ur9(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 1ur9(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 7
glycerin
Glycerol
PDB codes: 1e6p(A), 1ur8(A), 1ur9(A), 1w1p(A), 1w1t(A), 1w1v(A), 1w1y(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 6
glycerin
Glycerol
PDB codes: 1e6p(A), 1ur9(A), 1w1p(A), 1w1t(A), 1w1v(A), 1w1y(A).

 

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