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Ligand clusters for UniProt code Q50925
Ligand clusters for Q50925: Hydroxylamine oxidoreductase from Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)
Top 6 (of 15) ligand clusters
Cluster 1.
5 ligand types
34 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
6 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
2 ligand types
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4n4nA
Structures
PDB
Schematic diagram
4n4n
A
1fgj
A
4fas
A
4n4o
A
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
HEC × 24
Heme c
PDB codes:
1fgj
(A),
4fas
(A),
4n4n
(A),
4n4o
(A),
2. Ligand:
HEM × 7
Protoporphyrin IX containing fe
PDB codes:
1fgj
(A),
3. Ligand:
12P × 1
Dodecaethylene glycol
PDB code:
4n4o
(A).
4. Ligand:
ISW × 1
{3,3'-[(9s)-8,13-Diethenyl-3,7,12,17-Tetramethyl-9,10- Dihydroporphyrin-2,18-Diyl-
Kappa~4~n~21~,N~22~,N~23~, N~24~]dipropanoato(2-)}Iron
PDB code:
4fas
(A).
5. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
4fas
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
HEC × 2
Heme c
PDB codes:
4n4n
(A),
4n4o
(A).
2. Ligand:
ISW × 1
{3,3'-[(9s)-8,13-Diethenyl-3,7,12,17-Tetramethyl-9,10- Dihydroporphyrin-2,18-Diyl-
Kappa~4~n~21~,N~22~,N~23~, N~24~]dipropanoato(2-)}Iron
PDB code:
4fas
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
HEC × 6
Heme c
PDB codes:
4fas
(A),
4n4n
(A),
4n4o
(A),
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
HEC × 3
Heme c
PDB codes:
4fas
(A),
4n4n
(A),
4n4o
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4fas
(A).
2. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
4fas
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
PGE × 1
Triethylene glycol
PDB code:
4fas
(A).