Ligand clusters for UniProt code Q46E80

Ligand clusters for Q46E80: Uncharacterized protein from Methanosarcina barkeri (strain Fusaro / DSM 804)

		Top 6 (of 20) ligand clusters Cluster 1. 12 ligand types 31 ligands Cluster 2. 2 ligand types 4 ligands Cluster 3. 3 ligand types 11 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 2 ligand types 6 ligands Cluster 6. 2 ligand types 2 ligands
Representative protein: 4q3bA

Structures

PDB		Schematic diagram
4q3bA
4q3aA
4q3cA
4q3dA
4j4hA
		more ...

Cluster 1 contains 12 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 11 PDB codes: 4j43(A), 4j49(A), 4j4b(A), 4j4h(A), 4jk3(A), 4q39(A), 4q3a(A), 4q3b(A), 4q3c(A), 4q3d(A), 4q3e(A).
		2. Ligand: NAI × 5 nadh 1,4-Dihydronicotinamide adenine dinucleotide PDB codes: 4j4b(A), 4j4h(A), 4q39(A), 4q3a(A), 4q3b(A).
		3. Ligand: NAD × 6 Nicotinamide-Adenine-Dinucleotide PDB codes: 4j43(A), 4j49(A), 4jk3(A), 4q3c(A), 4q3d(A), 4q3e(A).
		4. Ligand: 0TF × 1 N~6~-D-Ornithyl-L-Lysine PDB code: 4j4b(A).
		5. Ligand: 1J1 × 1 N~6~-[(2r)-3,4-Dihydro-2h-Pyrrol-2-Ylcarbonyl]-L-Lysine PDB code: 4j4h(A).
		6. Ligand: 2YC × 1 N~6~-{[(2s,3s)-3-Methyl-3,4-Dihydro-2h-Pyrrol-2- Yl]carbonyl}-L-Lysine PDB code: 4q3a(A).
		7. Ligand: 2YF × 1 N~6~-[(2r)-2,3,4,5-Tetrahydropyridin-2-Ylcarbonyl]-L- Lysine PDB code: 4q3b(A).
		8. Ligand: 2YG × 1 N~6~-L-Lysyl-L-Lysine PDB code: 4q3c(A).
		9. Ligand: 2YH × 1 N~5~-D-Ornithyl-L-Ornithine PDB code: 4q3d(A).
		10. Ligand: 2YJ × 1 N~5~-D-Lysyl-L-Ornithine PDB code: 4q3e(A).
		11. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4q3e(A).
		12. Ligand: PYL × 1 Pyrrolysine PDB code: 4q39(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAI × 3 nadh 1,4-Dihydronicotinamide adenine dinucleotide PDB codes: 4j4b(A), 4q3a(A), 4q3b(A).
		2. Ligand: NAD × 1 Nicotinamide-Adenine-Dinucleotide PDB code: 4jk3(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 5 glycerin Glycerol PDB codes: 4q3a(A), 4q3b(A), 4q3c(A).
		2. Ligand: EDO × 5 1,2-Ethanediol PDB codes: 4q3a(A), 4q3b(A), 4q3c(A),
		3. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 4q3b(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4q3a(A).
		2. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 4q3d(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 4 glycerin Glycerol PDB codes: 4q39(A), 4q3a(A), 4q3b(A), 4q3c(A).
		2. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 4q3d(A), 4q3e(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4q3d(A).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 4q39(A).