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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q45697
Ligand clusters for Q45697: Uric acid degradation bifunctional protein from Bacillus sp. (strain TB-90)
Top 6 (of 10) ligand clusters
Cluster 1.
3 ligand types
16 ligands
Cluster 2.
3 ligand types
16 ligands
Cluster 3.
2 ligand types
5 ligands
Cluster 4.
2 ligand types
5 ligands
Cluster 5.
3 ligand types
7 ligands
Cluster 6.
2 ligand types
5 ligands
Representative protein: 1j2gA
Structures
PDB
Schematic diagram
1j2g
A
7cug
A
7cuf
A
5z2b
A
5yj2
A
more ...
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
AZA × 14
8-Azaxanthine
PDB codes:
1j2g
(A),
3wlv
(A),
4xfp
(A),
5y2p
(A),
5y52
(A),
5yj2
(A),
5yja
(A),
5z27
(A),
5z2b
(A),
7cmn
(A),
7cmq
(A),
7cuc
(A),
7cuf
(A),
7cug
(A).
2. Ligand:
MUA × 1
9-Methyl uric acid
PDB code:
5ayj
(A).
_Cl
3. Metal:
_CL × 1
PDB code:
3wlv
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
AZA × 14
8-Azaxanthine
PDB codes:
1j2g
(A),
3wlv
(A),
4xfp
(A),
5y2p
(A),
5y52
(A),
5yj2
(A),
5yja
(A),
5z27
(A),
5z2b
(A),
7cmn
(A),
7cmq
(A),
7cuc
(A),
7cuf
(A),
7cug
(A).
2. Ligand:
MUA × 1
9-Methyl uric acid
PDB code:
5ayj
(A).
_Cl
3. Metal:
_CL × 1
PDB code:
3wlv
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
MXE × 4
2-Methoxyethanol
PDB codes:
5yj2
(A),
7cuc
(A),
7cuf
(A),
7cug
(A).
2. Ligand:
P6G × 1
Hexaethylene glycol
PDB code:
5ayj
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
MXE × 4
2-Methoxyethanol
PDB codes:
5yj2
(A),
7cuc
(A),
7cuf
(A),
7cug
(A).
2. Ligand:
P6G × 1
Hexaethylene glycol
PDB code:
5ayj
(A).
Cluster 5 contains 3 ligand types
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Ligand
Description
1. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
5y2p
(A),
5y52
(A),
7cmn
(A).
2. Ligand:
MXE × 3
2-Methoxyethanol
PDB codes:
7cuc
(A),
7cuf
(A),
7cug
(A).
3. Ligand:
SO4 × 1
Sulfate ion
PDB code:
5ayj
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
MXE × 3
2-Methoxyethanol
PDB codes:
7cuc
(A),
7cuf
(A),
7cug
(A).
2. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
5y2p
(A),
7cmq
(A).