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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q45071
Ligand clusters for Q45071: Arabinoxylan arabinofuranohydrolase from Bacillus subtilis (strain 168)
Top 6 (of 7) ligand clusters
Cluster 1.
4 ligand types
8 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3c7gA
Structures
PDB
Schematic diagram
3c7g
A
3c7f
A
3c7o
A
3c7h
A
3c7e
A
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
3c7f
(A),
3c7g
(A),
3c7h
(A),
3c7o
(A).
2. Ligand:
XYP-XYP-XYP × 2
XYP
=Beta-D-Xylopyranose.
PDB codes:
3c7f
(A),
3c7h
(A).
3. Ligand:
BGC-BGC-BGC-BGC × 1
BGC
=Beta-D-Glucopyranose.
PDB code:
3c7o
(A).
4. Ligand:
XYP-XYP-XYP-XYP × 1
XYP
=Beta-D-Xylopyranose.
PDB code:
3c7g
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3c7f
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
3c7f
(A),
3c7o
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3c7f
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
3c7h
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 1
PDB code:
3c7e
(A).