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Ligand clusters for UniProt code Q3JK38
Ligand clusters for Q3JK38: Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei (strain 1710b)
5 ligand clusters
Cluster 1.
8 ligand types
11 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
2 ligands
Representative protein: 3uf8A
Structures
PDB
Schematic diagram
3uf8
A
6o49
A
4fn2
A
4ggq
C
4g50
A
more ...
Cluster 1 contains 8 ligand types
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Ligand
Description
1. Ligand:
FK5 × 2
tacrolimus
8-Deethyl-8-[But-3-Enyl]-Ascomycin
PDB codes:
3uf8
(A),
3uqb
(A).
2. Ligand:
861 × 2
3-(3,4,5-Trimethoxyphenyl)propyl (2s)-1- (Benzylsulfonyl)piperidine-2-Carboxylate
PDB codes:
4g50
(A),
4ggq
(C).
3. Ligand:
LLD × 2
2-(Pyridin-3-Ylcarbonylamino)ethyl (2~{s})-1- (Phenylmethyl)sulfonylpiperidine-2-Carboxylate
PDB codes:
6o4a
(A),
4. Ligand:
4GI × 1
3-(Pyridin-3-Yl)propyl (2s)-1-[(3-Nitrophenyl) sulfonyl]piperidine-2-Carboxylate
PDB code:
4giv
(A).
5. Ligand:
6UO × 1
2-[(2~{s})-1-(Phenylmethyl)sulfonylpiperidin-2- Yl]carbonyloxyethyl pyridine-3-Carboxylate
PDB code:
5klx
(A).
6. Ligand:
854 × 1
Ethyl (2s)-1-(Benzylsulfonyl)piperidine-2-Carboxylate
PDB code:
4fn2
(A).
7. Ligand:
LL7 × 1
(2~{s})-~{N}-[3-Oxidanylidene-3-[(3,4,5- Trimethoxyphenyl)amino]propyl]-1-(Phenylmethyl) sulfonyl-
Piperidine-2-Carboxamide
PDB code:
6o49
(A).
8. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
5klx
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
IMD × 1
Imidazole
PDB code:
5klx
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
IMD × 1
Imidazole
PDB code:
5klx
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6o49
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
5klx
(A).
_Ca
2. Metal:
_CA × 1
PDB code:
4ggq
(C).