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Ligand clusters for UniProt code Q3JK38

Ligand clusters for Q3JK38: Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei (strain 1710b)

5 ligand clusters
Cluster 1.
8 ligand types
11 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
2 ligands
Representative protein: 3uf8A  
JSmol
 

Structures

PDB   Schematic diagram
3uf8A    
6o49A    
4fn2A    
4ggqC    
4g50A    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: FK5 × 2
tacrolimus
8-Deethyl-8-[But-3-Enyl]-Ascomycin
PDB codes: 3uf8(A), 3uqb(A).


 
2. Ligand: 861 × 2
3-(3,4,5-Trimethoxyphenyl)propyl (2s)-1- (Benzylsulfonyl)piperidine-2-Carboxylate
PDB codes: 4g50(A), 4ggq(C).


 
3. Ligand: LLD × 2
2-(Pyridin-3-Ylcarbonylamino)ethyl (2~{s})-1- (Phenylmethyl)sulfonylpiperidine-2-Carboxylate
PDB codes: 6o4a(A),


 
4. Ligand: 4GI × 1
3-(Pyridin-3-Yl)propyl (2s)-1-[(3-Nitrophenyl) sulfonyl]piperidine-2-Carboxylate
PDB code: 4giv(A).


 
5. Ligand: 6UO × 1
2-[(2~{s})-1-(Phenylmethyl)sulfonylpiperidin-2- Yl]carbonyloxyethyl pyridine-3-Carboxylate
PDB code: 5klx(A).


 
6. Ligand: 854 × 1
Ethyl (2s)-1-(Benzylsulfonyl)piperidine-2-Carboxylate
PDB code: 4fn2(A).


 
7. Ligand: LL7 × 1
(2~{s})-~{N}-[3-Oxidanylidene-3-[(3,4,5- Trimethoxyphenyl)amino]propyl]-1-(Phenylmethyl) sulfonyl-
Piperidine-2-Carboxamide
PDB code: 6o49(A).


 
8. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 5klx(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: IMD × 1
Imidazole
PDB code: 5klx(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: IMD × 1
Imidazole
PDB code: 5klx(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6o49(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 5klx(A).

_Ca
 
2. Metal: _CA × 1
PDB code: 4ggq(C).

 

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