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Ligand clusters for UniProt code Q3J5G0

Ligand clusters for Q3J5G0: Cytochrome c oxidase subunit 2 from Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)

Top 6 (of 14) ligand clusters
Cluster 1.
1 ligand type
6 ligands
Cluster 2.
2 ligand types
6 ligands
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
6 ligands
Cluster 5.
2 ligand types
6 ligands
Cluster 6.
1 ligand type
6 ligands
Representative protein: 3om3B  
JSmol
 

Structures

PDB   Schematic diagram
3om3B    
3omaB    
3omnB    
3omiB    
6pw0B    
 more ...

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: HEA × 6
Heme-A
PDB codes: 3om3(B), 3oma(B), 3omi(B), 3omn(B), 6pw0(B), 6pw1(B).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: DMU × 4
Decyl-Beta-D-Maltopyranoside
PDB codes: 3om3(B), 3oma(B), 3omi(B), 3omn(B).


 
2. Ligand: GLC-GLC × 2
GLC=Alpha-D-Glucopyranose.
PDB codes: 6pw0(B), 6pw1(B).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: DMU × 4
Decyl-Beta-D-Maltopyranoside
PDB codes: 3om3(B), 3oma(B), 3omi(B), 3omn(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: DMU × 6
Decyl-Beta-D-Maltopyranoside
PDB codes: 3om3(B), 3oma(B), 3omi(B), 3omn(B), 6pw0(B), 6pw1(B).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: TRD × 4
Tridecane
PDB codes: 3om3(B), 3oma(B), 3omi(B), 3omn(B).


 
2. Ligand: HTH × 2
(2s,3r)-Heptane-1,2,3-Triol
PDB codes: 6pw0(B), 6pw1(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRD × 6
Tridecane
PDB codes: 3om3(B), 3oma(B), 3omi(B), 3omn(B), 6pw0(B), 6pw1(B).

 

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