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EBI
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Ligand clusters for UniProt code Q3J5G0
Ligand clusters for Q3J5G0: Cytochrome c oxidase subunit 2 from Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
Top 6 (of 14) ligand clusters
Cluster 1.
1 ligand type
6 ligands
Cluster 2.
2 ligand types
6 ligands
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
6 ligands
Cluster 5.
2 ligand types
6 ligands
Cluster 6.
1 ligand type
6 ligands
Representative protein: 3om3B
Structures
PDB
Schematic diagram
3om3
B
3oma
B
3omn
B
3omi
B
6pw0
B
more ...
Cluster 1 contains 1 ligand type
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Ligand
Description
1. Ligand:
HEA × 6
Heme-A
PDB codes:
3om3
(B),
3oma
(B),
3omi
(B),
3omn
(B),
6pw0
(B),
6pw1
(B).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
DMU × 4
Decyl-Beta-D-Maltopyranoside
PDB codes:
3om3
(B),
3oma
(B),
3omi
(B),
3omn
(B).
2. Ligand:
GLC-GLC × 2
GLC
=Alpha-D-Glucopyranose.
PDB codes:
6pw0
(B),
6pw1
(B).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
DMU × 4
Decyl-Beta-D-Maltopyranoside
PDB codes:
3om3
(B),
3oma
(B),
3omi
(B),
3omn
(B).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
DMU × 6
Decyl-Beta-D-Maltopyranoside
PDB codes:
3om3
(B),
3oma
(B),
3omi
(B),
3omn
(B),
6pw0
(B),
6pw1
(B).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
TRD × 4
Tridecane
PDB codes:
3om3
(B),
3oma
(B),
3omi
(B),
3omn
(B).
2. Ligand:
HTH × 2
(2s,3r)-Heptane-1,2,3-Triol
PDB codes:
6pw0
(B),
6pw1
(B).
Cluster 6 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
TRD × 6
Tridecane
PDB codes:
3om3
(B),
3oma
(B),
3omi
(B),
3omn
(B),
6pw0
(B),
6pw1
(B).