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Ligand clusters for UniProt code Q2FIA5

Ligand clusters for Q2FIA5: Coenzyme A disulfide reductase from Staphylococcus aureus (strain USA300)

3 ligand clusters
Cluster 1.
6 ligand types
15 ligands
Cluster 2.
6 ligand types
14 ligands
Cluster 3.
1 ligand type
4 ligands
Representative protein: 4em3A  
JSmol
 

Structures

PDB   Schematic diagram
4em3A    
4eqsA    
4eqrA    
4em4A    
4emwA    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: FAD × 7
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 4em3(A), 4em4(A), 4emw(A), 4eqr(A), 4eqs(A), 4eqw(A), 4eqx(A).


 
2. Ligand: COA × 3
Coenzyme a
PDB codes: 4eqr(A), 4eqs(A), 4eqw(A).

_Cl
 
3. Metal: _CL × 2
PDB codes: 4eqw(A), 4eqx(A).


 
4. Ligand: CA6 × 1
[[(2r,3s,4r,5r)-5-(6-Aminopurin-9-Yl)-4-Oxidanyl-3- Phosphonooxy-Oxolan-2-Yl]methoxy-Oxidanyl-
Phosphoryl] [(3r)-2,2-Dimethyl-4-[[3-(4-Methylsulfonylbutylamino)- 3-Oxidanylidene-Propyl]amino]-
3-Oxidanyl-4- Oxidanylidene-Butyl] hydrogen phosphate
PDB code: 4em3(A).


 
5. Ligand: CA8 × 1
[[(2r,3s,4r,5r)-5-(6-Aminopurin-9-Yl)-4-Oxidanyl-3- Phosphonooxy-Oxolan-2-Yl]methoxy-Oxidanyl-
Phosphoryl] [(3r)-2,2-Dimethyl-3-Oxidanyl-4-Oxidanylidene-4-[[3- Oxidanylidene-3-[4-
(Phenylsulfonyl) butylamino]propyl]amino]butyl] hydrogen phosphate
PDB code: 4em4(A).


 
6. Ligand: CAJ × 1
Ethyl 5-[3-[[(2r)-4-[[[(2r,3s,4r,5r)-5-(6-Aminopurin-9- Yl)-4-Oxidanyl-3-Phosphonooxy-Oxolan-2-
Yl]methoxy- Oxidanyl-Phosphoryl]oxy-Oxidanyl-Phosphoryl]oxy-3,3- Dimethyl-2-Oxidanyl-
Butanoyl]amino]propanoylamino]pentanoate
PDB code: 4emw(A).

 

 Cluster 2 contains 6 ligand types

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Ligand Description


 
1. Ligand: FAD × 7
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 4em3(A), 4em4(A), 4emw(A), 4eqr(A), 4eqs(A), 4eqw(A), 4eqx(A).


 
2. Ligand: COA × 3
Coenzyme a
PDB codes: 4eqr(A), 4eqs(A), 4eqw(A).


 
3. Ligand: CA6 × 1
[[(2r,3s,4r,5r)-5-(6-Aminopurin-9-Yl)-4-Oxidanyl-3- Phosphonooxy-Oxolan-2-Yl]methoxy-Oxidanyl-
Phosphoryl] [(3r)-2,2-Dimethyl-4-[[3-(4-Methylsulfonylbutylamino)- 3-Oxidanylidene-Propyl]amino]-
3-Oxidanyl-4- Oxidanylidene-Butyl] hydrogen phosphate
PDB code: 4em3(A).


 
4. Ligand: CA8 × 1
[[(2r,3s,4r,5r)-5-(6-Aminopurin-9-Yl)-4-Oxidanyl-3- Phosphonooxy-Oxolan-2-Yl]methoxy-Oxidanyl-
Phosphoryl] [(3r)-2,2-Dimethyl-3-Oxidanyl-4-Oxidanylidene-4-[[3- Oxidanylidene-3-[4-
(Phenylsulfonyl) butylamino]propyl]amino]butyl] hydrogen phosphate
PDB code: 4em4(A).


 
5. Ligand: CAJ × 1
Ethyl 5-[3-[[(2r)-4-[[[(2r,3s,4r,5r)-5-(6-Aminopurin-9- Yl)-4-Oxidanyl-3-Phosphonooxy-Oxolan-2-
Yl]methoxy- Oxidanyl-Phosphoryl]oxy-Oxidanyl-Phosphoryl]oxy-3,3- Dimethyl-2-Oxidanyl-
Butanoyl]amino]propanoylamino]pentanoate
PDB code: 4emw(A).

_Cl
 
6. Metal: _CL × 1
PDB code: 4eqs(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 4
PDB codes: 4eqr(A), 4eqs(A), 4eqw(A), 4eqx(A).

 

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