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EBI
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PDBsum
Ligand clusters for UniProt code Q26966
Ligand clusters for Q26966: Trans-sialidase from Trypanosoma cruzi
4 ligand clusters
Cluster 1.
8 ligand types
14 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 3pjqA
Structures
PDB
Schematic diagram
3pjq
A
3opz
A
1ms8
A
2ah2
A
1ms1
A
more ...
Cluster 1 contains 8 ligand types
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
1ms1
(A),
2ah2
(A),
2. Ligand:
DAN × 3
2-Deoxy-2,3-Dehydro-N-Acetyl-Neuraminic acid
PDB codes:
1ms0
(A),
1ms1
(A),
1ms8
(A).
3. Ligand:
BGC-GAL × 2
BGC
=Beta-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose.
PDB codes:
1ms0
(A),
1ms9
(A).
4. Ligand:
DIO × 1
1,4-Diethylene dioxide
PDB code:
3opz
(A).
5. Ligand:
FSI × 1
5-Acetamido-3,5-Dideoxy-3-Fluoro-D-Erythro-Alpha-L- Manno-Non-2-Ulopyranosonic acid
PDB code:
2ah2
(A).
6. Ligand:
GLC-GAL × 1
GLC
=Alpha-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose.
PDB code:
3pjq
(A).
7. Ligand:
GLC-GAL-SIA × 1
GLC
=Alpha-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose,
SIA
=N-Acetyl-Alpha-Neuraminic acid.
PDB code:
1s0i
(A).
8. Ligand:
MUS × 1
4-Methyl-2-Oxo-2h-Chromen-7-Yl 5-(Acetylamino)-3,5- Dideoxy-L-Erythro-Non-2-Ulopyranosidonic acid
PDB code:
1s0j
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
2ah2
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
IPA × 1
isopropyl alcohol
Isopropyl alcohol
PDB code:
2ah2
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Na
1. Metal:
_NA × 1
PDB code:
3opz
(A).