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Ligand clusters for UniProt code Q26966

Ligand clusters for Q26966: Trans-sialidase from Trypanosoma cruzi

4 ligand clusters
Cluster 1.
8 ligand types
14 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 3pjqA  
JSmol
 

Structures

PDB   Schematic diagram
3pjqA    
3opzA    
1ms8A    
2ah2A    
1ms1A    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: GOL × 4
glycerin
Glycerol
PDB codes: 1ms1(A), 2ah2(A),


 
2. Ligand: DAN × 3
2-Deoxy-2,3-Dehydro-N-Acetyl-Neuraminic acid
PDB codes: 1ms0(A), 1ms1(A), 1ms8(A).


 
3. Ligand: BGC-GAL × 2
BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose.
PDB codes: 1ms0(A), 1ms9(A).


 
4. Ligand: DIO × 1
1,4-Diethylene dioxide
PDB code: 3opz(A).


 
5. Ligand: FSI × 1
5-Acetamido-3,5-Dideoxy-3-Fluoro-D-Erythro-Alpha-L- Manno-Non-2-Ulopyranosonic acid
PDB code: 2ah2(A).


 
6. Ligand: GLC-GAL × 1
GLC=Alpha-D-Glucopyranose, GAL=Beta-D-Galactopyranose.
PDB code: 3pjq(A).


 
7. Ligand: GLC-GAL-SIA × 1
GLC=Alpha-D-Glucopyranose, GAL=Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid.
PDB code: 1s0i(A).


 
8. Ligand: MUS × 1
4-Methyl-2-Oxo-2h-Chromen-7-Yl 5-(Acetylamino)-3,5- Dideoxy-L-Erythro-Non-2-Ulopyranosidonic acid
PDB code: 1s0j(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2ah2(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: IPA × 1
isopropyl alcohol
Isopropyl alcohol
PDB code: 2ah2(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 3opz(A).

 

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