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Ligand clusters for UniProt code Q1XGK3

Ligand clusters for Q1XGK3: 4-oxalocrotonate decarboxylase NahK from Pseudomonas putida

Top 6 (of 22) ligand clusters
Cluster 1.
5 ligand types
12 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
6 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5d2fA  
JSmol
 

Structures

PDB   Schematic diagram
5d2fA    
5d2jA    
5d2kA    
5d2hA    
5d2gA    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: EDO × 7
1,2-Ethanediol
PDB codes: 5d2f(A), 5d2g(A), 5d2h(A), 5d2i(A),


 
2. Ligand: ACT × 2
Acetate ion
PDB codes: 5d2i(A),


 
3. Ligand: 0L1 × 1
Hexanedioic acid
PDB code: 5d2j(A).


 
4. Ligand: AKG × 1
2-Oxoglutaric acid
PDB code: 5d2h(A).


 
5. Ligand: OOG × 1
2-Oxoadipic acid
PDB code: 5d2k(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 5d2g(A), 5d2h(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 6
1,2-Ethanediol
PDB codes: 5d2f(A), 5d2g(A), 5d2h(A), 5d2j(A), 5d2k(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5d2f(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 5d2f(A), 5d2h(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 5d2f(A).

 

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